Do you rely on chatbots for doing your research? Are you using STRING? Good news: there's a chat interface for that too!
https://youtu.be/Qss0jxGNlMk
#ai #bioinformatics #networkbiology #systemsbiology

Call for Papers:

Omics and Metabolic Networks in Microbial Xenobiotic Degradation and Detoxification.

Special Issue aims to bring together research and reviews that integrate omics data, metabolic network analysis, and ecological perspectives to elucidate microbial mechanisms involved in xenobiotic degradation and detoxification.

#Xenobiotics #biodegradation #Metagenomics #SystemsBiology #environment #Bioremediation #ecology

https://www.sciencedirect.com/special-issue/334118/omics-and-metabolic-networks-in-microbial-xenobiotic-degradation-and-detoxification

๐Ÿงฌ Ready to dive into biochemical modeling? Join our beginner-friendly intro tutorial for COPASI, the widely used tool for simulation and analysis of reaction networks!
Learn everything from GUI basics and building models to time-course simulations, plotting, and tool interoperability. ๐Ÿงช
๐Ÿ“… July 8th, 2026 | 09:30 - 11:00 CEST
๐Ÿ“ Online
๐Ÿ‘ฅ Perfect for beginners!
๐Ÿ“ Registration: https://www.denbi.de/training-courses-2026/2106-introduction-to-copasi
#COPASI #SystemsBiology #Bioinformatics #OpenScience #Biotech #Webinar

๐Ÿค– Have we built AI powerful enough to design proteins, but too complicated for most scientists to use?

๐Ÿ”— BioPipelines: Accessible Computational Protein and Ligand Design for Chemical Biologists. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0129

๐Ÿ“š CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#BioPipelines #ProteinEngineering #ComputationalBiology #ProteinDesign #SyntheticBiology #Bioinformatics #AlphaFold #SystemsBiology #AI

๐Ÿ“ข Call for Papers: Computational Spatial Omics - Multimodal Strategies for Systems Biology and Biomedical Discovery

โณ Submission Deadline: 31 December 2026

๐Ÿ”— Submit your work: https://spj.science.org/journal/csbj/si/computational-spatial-omics

#CallForPapers #SpatialOmics #SpatialTranscriptomics #SpatialProteomics #Metabolomics #Lipidomics #Multiomics #ComputationalBiology #SystemsBiology #Bioinformatics #AIinHealthcare #DigitalPathology #GraphNeuralNetworks #PrecisionMedicine

๐Ÿง  What if missing data is not a flaw, but one of the most informative parts of a complex system?

๐Ÿ”— Informative Missingness in Nominal Data: A Graph-Theoretic Approach to Revealing Hidden Structure. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0099

๐Ÿ“š CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#DataScience #BigData #GraphTheory #ComputationalBiology #NetworkScience #Bioinformatics #SystemsBiology #BiomedicalResearch #MissingData

"INTOXICOM Workshop Report: Systems Biology Models for Toxicology" https://doi.org/10.37044/osf.io/zf2qj_v1

"The workshop took place under the INTOXICOM Implementation Study workshop series (Integrating the toxicology community into ELIXIR 2024) and aimed to strengthen connections between systems biologyand toxicology by bridging ELIXIR resources with systems toxicology modelling approaches used for chemical risk assessment." https://index.biohackrxiv.org/2026/05/20/zf2qj.html

#systemsBiology #toxicology #INTOXICOM

๐Ÿ“ข We are pleased to announce that authors can now submit manuscripts directly from bioRxiv to CSBJ through the ๐—ฏ๐—ถ๐—ผ๐—ฅ๐˜…๐—ถ๐˜ƒ-๐˜๐—ผ-๐—๐—ผ๐˜‚๐—ฟ๐—ป๐—ฎ๐—น (B2J) transfer service.

๐Ÿ™We sincerely thank Cold Spring Harbor Laboratory (CSHL) for integrating CSBJ into the B2J service.

#CSBJ #bioRxiv #AAAS #OpenScience #Preprints #SystemsBiology #StructuralBiology #Biotechnology #ComputationalBiology #Omics #Nanoscience #MedicalInformatics #Biomedicine #AdvancedMaterials #Biomaterials #QuantumBiology #Biophotonics

๐Ÿฆ  Could we outsmart antibiotic resistance by turning bacteria against themselves?

๐Ÿ”— Rational Targeting and gRNA Design for Enhancing Quorum Quenching in Pseudomonas aeruginosa PAO1. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0089

๐Ÿ“š CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#AntimicrobialResistance #AMR #CRISPR #GeneEditing #SyntheticBiology #SystemsBiology #Microbiology #Biotechnology #DrugResistance #QuorumSensing #Biofilms #Genomics

๐Ÿงฌ Could a single metric decode how genes are regulated across cells?

๐Ÿ”— Regulation Ratio: A Singular Multi-Omic Measurement of Gene Regulatory Mechanisms. Computational and Structural Biotechnology Journal (CSBJ). DOI: https://doi.org/10.34133/csbj.0044

๐Ÿ“š CSBJ - A Science Partner Journal: https://spj.science.org/journal/csbj

#GeneRegulation #Genomics #MultiOmics #SystemsBiology #Bioinformatics #ComputationalBiology #MolecularBiology #RNA #GeneExpression #Epigenetics #Transcriptomics