We are the @elixir_europe training platform
de.NBI & ELIXIR Germany
@deNBI@mstdn.science
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The de.NBI network provides bioinformatics services and comprehensive compute resources to researchers in the life sciences and biomedicine in Germany and Europe. Since August 2016 the German Node of ELIXIR, ELIXIR Germany, is run by de.NBI partners.
@deNBI is this week in Barcelona for the @elixir_europe training platform and training coordinator meeting
de.NBI & GerBI: Centralized #OMERO for the German BioImaging community
We signed a MoU with German BioImaging (GerBI) to set up a centralized OMERO instance on the de.NBI Cloud.
galaxyproject🍎 Upcoming training: Galaxy Metagenome Training Course 2026
Hosted by @deNBI, this hands-on training on metagenomic data analysis using Galaxy will focus on reproducible, accessible workflows.
Learn more & register: https://www.denbi.de/training-courses-2026/2018-galaxy-metagenome-training-course-2026
Galaxy Metagenome Training Course 2026
The 'German Network for Bioinformatics Infrastructure – de.NBI' is a national, academic and non-profit infrastructure supported by the Federal Ministry of Education and Research providing bioinformatics services to users in life sciences research and biomedicine in Germany and Europe. The partners organize training events, courses and summer schools on tools, standards and compute services provided by de.NBI to assist researchers to more effectively exploit their data.
SimpleVM: Cloud computing without configuration complexity. Set up virtual machines in just a few clicks, run RStudio directly in your browser, manage computational workflows with built-in SNORT-based security. Focus on your research, not infrastructure management. Part of de.NBI's curated bioinformatics services. Learn more: https://simplevm.github.io/
sneumannGetting ready to deliver the OpenMS / CIBI Plant Proteomics and Metabolomics Training here at University of the Western Cape with @dtabb73 , @samweingamgee , Oliver Kohlbacher and Tom Müller.
https://www.denbi.de/training-courses-2026/2019-openms-cibi-plant-proteomics-and-metabolomics-training
https://www.denbi.de/training-courses-2026/2019-openms-cibi-plant-proteomics-and-metabolomics-training
OpenMS / CIBI Plant Proteomics and Metabolomics Training - Part 1
The 'German Network for Bioinformatics Infrastructure – de.NBI' is a national, academic and non-profit infrastructure supported by the Federal Ministry of Education and Research providing bioinformatics services to users in life sciences research and biomedicine in Germany and Europe. The partners organize training events, courses and summer schools on tools, standards and compute services provided by de.NBI to assist researchers to more effectively exploit their data.
🌿 Excited to announce the
Biodiversity Bioinformatics Summer School 2026!
🗓️ 21–26 June 2026
📍 Siegen, Germany
🤝 Jointly organised by @deNBI and @SIB
🔬 Project-based, hands-on summer school:
• Biodiversity across scales (eDNA to ecosystems)
• Pangenomes & genetic diversity
• Genomic Essential Biodiversity Variables
• Comparative genomics insights
👩💻 Group work, expert trainers, lectures & networking
📝 For more jnformation see: https://www.denbi.de/de-nbi-events/2029-biodiversity-bioinformatics-summer-school-2026
#Biodiversity #Bioinformatics
Biodiversity Bioinformatics Summer School 2026!
🗓️ 21–26 June 2026
📍 Siegen, Germany
🤝 Jointly organised by @deNBI and @SIB
🔬 Project-based, hands-on summer school:
• Biodiversity across scales (eDNA to ecosystems)
• Pangenomes & genetic diversity
• Genomic Essential Biodiversity Variables
• Comparative genomics insights
👩💻 Group work, expert trainers, lectures & networking
📝 For more jnformation see: https://www.denbi.de/de-nbi-events/2029-biodiversity-bioinformatics-summer-school-2026
#Biodiversity #Bioinformatics
Wolfgang Maier#Bioinformatics question: I'm looking for an open-source command-line tool that would migrate genbank features. So given a genbank file and an alignment between the genbank sequence and another one, it should adjust the genbank features to their positions in the new sequence.
I'm not interested in any closed-source solutions and I cannot imagine there isn't a free solution to this, but I cannot find anything.
🆕 Next up in our global training series:
SysMeC Workshop on Lipidomics Data Analysis
📅 Feb 23, 2026 | 📍 Singapore
🧬 Hands-on sessions & lectures on mass spectrometry-based lipidomics, study design, and bioinformatics tools like LipidCreator & Skyline.
Open to early-career & experienced scientists—boost your skills in lipidomics data analysis!
🔗 https://www.denbi.de/training-courses-2026/2027-sysmec-workshop-on-lipidomics-data-analysis
#Lipidomics #Bioinformatics #MassSpectrometry #Training #SysMeC
SysMeC Workshop on Lipidomics Data Analysis
📅 Feb 23, 2026 | 📍 Singapore
🧬 Hands-on sessions & lectures on mass spectrometry-based lipidomics, study design, and bioinformatics tools like LipidCreator & Skyline.
Open to early-career & experienced scientists—boost your skills in lipidomics data analysis!
🔗 https://www.denbi.de/training-courses-2026/2027-sysmec-workshop-on-lipidomics-data-analysis
#Lipidomics #Bioinformatics #MassSpectrometry #Training #SysMeC
Boas PuckerFinal day of our Python course: Students are presenting individual projects in which they developed tools for the analysis of biological datasets.
The combination of human creativity and thoughtful use of AI led to impressive solutions.
All teaching materials are openly available:
https://github.com/bpucker/teaching/tree/master/WBIO-A-07
#Python #Bioinformatics #OpenScience #Teaching
@PuckerLab
@samnm
