🧬 Earlier this year, members of the Bioconductor community met on San Servolo Island, Italy, for a three-day hackathon on spatial omics and bioimaging. They tackled challenges in spatial data infrastructure, interoperability, image analysis, visualisation, differential expression, and foundation models, producing new code, documentation, and a collaborative preprint to bolster spatial omics support across Bioconductor.

📖 Read more: https://blog.bioconductor.org/posts/2026-06-17-venice/

#Bioconductor #SpatialOmics

Our second practical course took place in sunny Naples at @SZN! ☀️ 🌊 👨‍🔬 👩‍🔬

Over two weeks, DCs gained hands-on experience with image analysis tools, spatial transcriptomics, and much more.

Check out @KevinGr recap for a look back at the highlights and the full experience.

https://zoocell.eu/2026/06/15/modern-techniques-in-an-ancient-city-2nd-zoocell-practical-course-at-szn-in-naples/

#MSCA #volumeEM #AItools #spatialOmics

Postdoctoral Fellow in Computational Biology

Post a job in 3min, or find thousands of job offers like this one at jobRxiv!

jobRxiv

📢 Call for Papers: Computational Spatial Omics - Multimodal Strategies for Systems Biology and Biomedical Discovery

⏳ Submission Deadline: 31 December 2026

🔗 Submit your work: https://spj.science.org/journal/csbj/si/computational-spatial-omics

#CallForPapers #SpatialOmics #SpatialTranscriptomics #SpatialProteomics #Metabolomics #Lipidomics #Multiomics #ComputationalBiology #SystemsBiology #Bioinformatics #AIinHealthcare #DigitalPathology #GraphNeuralNetworks #PrecisionMedicine

🧬 Job: Postdoc in Computational Biology & Spatial Multi-Omics | DKFZ Heidelberg
Join the PRELUNG study on early lung cancer detection! You will lead integrative analyses of:

- Spatial transcriptomics
- Genomics
- Histopathology & radiomics

The role combines multi-omics, biomarker discovery, clinical collaboration, and a unique patient return-of-data framework.
🎓 PhD with strong R/Python & clustering skills wanted.
🔗 https://www.denbi.de/de-nbi-jobs-portal/2098-postdoctoral-researcher-computational-biology-spatial-multi-omics-dkfz-heidelberg
#Bioinformatics #SpatialOmics #DKFZ #Jobs #R #Python

New tool for #SpatialOmics: With C-COMPASS, researchers can analyze the distribution of proteins and lipids in cells – no programming skills required. Developed by #HelmholtzMunich, #DZD & #UniBonn.
https://nachrichten.idw-online.de/2025/12/04/c-compass-ai-based-software-maps-proteins-and-lipids-within-cells
C-COMPASS: AI-Based Software Maps Proteins and Lipids Within Cells

Neues Tool für #SpatialOmics: Mit C-COMPASS können Forschende die Verteilung von Proteinen und Lipiden in Zellen analysieren – ganz ohne Programmierkenntnisse. Entwickelt von #HelmholtzMunich, #DZD & #UniBonn.
https://nachrichten.idw-online.de/2025/12/04/c-compass-ki-basierte-software-kartiert-proteine-und-lipide-in-zellen
C-COMPASS: KI-basierte Software kartiert Proteine und Lipide in Zellen

🧬✨ Reminder: Intro to Spatial #Transcriptomics Webinar!
Nov 20, 2025 · 13:00 CET · With @ghga Florian Heyl
Get started with image-based spatial omics & key preprocessing steps.
Free, in English—registration required! More information: https://www.denbi.de/de-nbi-events/1967-the-de-nbi-elixir-de-and-ghga-knowledge-series-image-based-spatial-transcriptomics-technologies
#SpatialOmics #Webinar

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyfreiburg
#UseGalaxy #GalaxyProject #EOSC #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch #GalaxyCommunity #SPOC (1/2)

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.
https://galaxyproject.org/news/2025-10-14-spoc-cellgenomics/

@galaxyproject
#UseGalaxy #GalaxyProject #EOSC #UniFreiburg #SingleCell #SpatialOmics #Omics #Transcriptomics #Bioinformatics #Genomics #ComputationalBiology #EuroScienceGateway #OpenScience #ReproducibleResearch (1/2)