Pipeline release! nf-core/proteinannotator v1.1.0 - Crimson Quokka!
Generation of sequence-level annotations for amino acid sequences
Please see the changelog: https://github.com/nf-core/proteinannotator/releases/tag/1.1.0

#annotation #proteomics #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/rnaseq v3.26.0 - nf-core/rnaseq v3.26.0 - Chromium Cuttlefish!
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Please see the changelog: https://github.com/nf-core/rnaseq/releases/tag/3.26.0

#rna #rnaseq #nfcore #openscience #nextflow #bioinformatics

RE: https://mstdn.science/@nf_core/116396163905770608

📣 Last call! Registration to join the hybrid #virus #bioinformatics hackathon shuts end of tomorrow!

👇 Details below!

Pipeline release! nf-core/proteinfamilies v2.3.0 - Iron Wolf!
Generation and updating of protein families
Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/2.3.0

#metagenomics #proteinfamilies #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.6.0 - nf-core/bacass v2.6.0 - Crimson Titanium Seahorse!
Simple bacterial assembly and annotation pipeline
Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.6.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/createtaxdb v3.0.0 - v3.0.0 - Mystical Medusa - [2026-04-30]!
Parallelised and automated construction of metagenomic classifier databases of different tools
Please see the changelog: https://github.com/nf-core/createtaxdb/releases/tag/3.0.0

#database #databasebuilder #metagenomicprofiling #metagenomics #profiling #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/rnaseq v3.25.0 - nf-core/rnaseq v3.25.0 - Plutonium Pangolin!
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Please see the changelog: https://github.com/nf-core/rnaseq/releases/tag/3.25.0

#rna #rnaseq #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/variantbenchmarking v1.5.0 - Vegetarian Han!
Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research
Please see the changelog: https://github.com/nf-core/variantbenchmarking/releases/tag/1.5.0

#benchmark #smallvariants #structuralvariants #variantcalling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/demultiplex v1.7.1 - 1.7.1!
Demultiplexing pipeline for sequencing data
Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.7.1

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/ampliseq v2.17.0 - Ampliseq Version 2.17.0!
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.17.0

#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #metataxonomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics