Stephen Turner3d ago
nf-core/cutandrun: A #Nextflow pipeline for the analysis of CUT&RUN, CUT&Tag and TIP-seq datasets joss.theoj.org/papers/10.21... 🧬💻🧪 github.com/nf-core/cuta...
Pierre Lindenbaum4d ago

#nextflow : "The strict syntax will eventually become the only way to write Nextflow code,"

$ find . -type f -name "main.nf" |wc -l
495

#crying 😭

nf-core4d ago

Pipeline release! nf-core/rnafusion v4.1.0 - 4.1.0!

Please see the changelog: https://github.com/nf-core/rnafusion/releases/tag/4.1.0

#fusion #fusiongenes #genefusion #rna #rnaseq #nfcore #openscience #nextflow #bioinformatics

nextflow4d ago
Long time without a new version of #ibm #nomad #nextflow executor

 release 0.4.0-edge3 has just been published

You can find the changelog at
https://github.com/nextflow-io/nf-nomad/releases/tag/0.4.0-edge3
Release 0.4.0-edge3 · nextflow-io/nf-nomad

Changelog What's Changed Update test setup with terraform driven local nomad+minio setup by @abhi18av in #112 Fix: Fallback to Nomad TaskEvents for exit code if .command.exit is missing by @matth...

GitHub
James Fellows Yates5d ago

X-post from Bluesky:

🧑‍💻Satellite Hackathon at #ViBioM2026!

Join the #Virus #Bioinformatics + @nf_core Hybrid Collaborative #Hackathon & collaborate on bioinformatic tools and ideas & contribute to reproducible workflows & research infrastructure.

Want to write nf-core modules for virus tools? Convert viral analysis workflows to #Nextflow? Add tools to #bioconda ? Contribute VirJenDB? Or your own project?

(supported by @NFDI4Microbiota )

Register your interest 👇

https://evbc.uni-jena.de/events/vibiom2026/hackathon-satellite-event/

nf-coreMar 13

Pipeline release! nf-core/ribomsqc vv1.0.0 - nf-core/ribomsqc v1.0.0!

QC pipeline that monitors mass spectrometer performance in ribonucleoside analysis

Please see the changelog: https://github.com/nf-core/ribomsqc/releases/tag/v1.0.0

#nfcore #openscience #nextflow #bioinformatics

Release nf-core/ribomsqc v1.0.0 · nf-core/ribomsqc

nf-core/ribomsqc: Changelog The format is based on Keep a Changelog and this project adheres to Semantic Versioning. v1.0.0 - 2026-03-11 Added #27 - Added new quantification markers to XIC line pl...

GitHub
nf-coreMar 12

Pipeline release! nf-core/longraredisease v1.0.0 - Longraredisease 1.0.0 !

Please see the changelog: https://github.com/nf-core/longraredisease/releases/tag/1.0.0

#nfcore #openscience #nextflow #bioinformatics

Release Longraredisease 1.0.0 · nf-core/longraredisease

First release

GitHub
nf-coreMar 12

Pipeline release! nf-core/mag v5.4.1 - mag 5.4.1 - Yellow Frog patch!
Assembly and binning of metagenomes
Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.4.1

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

nf-coreMar 9

Pipeline release! nf-core/scnanoseq v1.2.2 - nf-core/scnanoseq v1.2.2 - Thallium Tiger!

Please see the changelog: https://github.com/nf-core/scnanoseq/releases/tag/1.2.2

#10xgenomics #longreadsequencing #nanopore #rnaseq #scrnaseq #singlecell #nfcore #openscience #nextflow #bioinformatics

nf-coreMar 9

Pipeline release! nf-core/pixelator v3.0.1 - nf-core/pixelator 3.0.1!
Pipeline to generate Molecular Pixelation data with Pixelator (Pixelgen Technologies AB)
Please see the changelog: https://github.com/nf-core/pixelator/releases/tag/3.0.1

#molecularpixelation #pixelator #pixelgentechnologies #proteins #singlecell #singlecellomics #nfcore #openscience #nextflow #bioinformatics