Pipeline release! nf-core/drop v1.0.0 - 1.0.0 - Red Dragon!
Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders
Please see the changelog: https://github.com/nf-core/drop/releases/tag/1.0.0

#nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/mag v5.4.2 - mag 5.4.2 - Yellow Frog patch!
Assembly and binning of metagenomes
Please see the changelog: https://github.com/nf-core/mag/releases/tag/5.4.2

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/viralmetagenome v1.1.1 - v1.1.1 - Azure Albatross!
A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples.
Please see the changelog: https://github.com/nf-core/viralmetagenome/releases/tag/1.1.1

#epidemiology #fastq #ngs #viralmetagenomics #virology #virusgenomes #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/proteinfold v2.0.0 - Montseny Brook Newt!
Protein 3D structure prediction pipeline
Please see the changelog: https://github.com/nf-core/proteinfold/releases/tag/2.0.0

#alphafold2 #colabfold #esmfold #proteinfoldprediction #proteinfolding #proteinsequences #proteinstructure #nfcore #openscience #nextflow #bioinformatics

#nfcore and #VirJenDB plan a hybrid #hackathon on 17 May as a satellite event of #ViBioM2026 toward #opensource #virus #bioinformatics workflows.

Proposed projects
- expand VirJenDB visualizations with an atlas
- work on an existing nf-core virus workflow
- port your tool to bioconda and other #Nextflow prep

👉 Propose your project and indicate your interest: https://forms.gle/KWJYPCXgGotmrhCu8.

📝 Registration opens April 2026! More: https://tinyurl.com/mefewbw4.

#EVBC #deNBI

#nextflow : "The strict syntax will eventually become the only way to write Nextflow code,"

$ find . -type f -name "main.nf" |wc -l
495

#crying 😭

Pipeline release! nf-core/rnafusion v4.1.0 - 4.1.0!

Please see the changelog: https://github.com/nf-core/rnafusion/releases/tag/4.1.0

#fusion #fusiongenes #genefusion #rna #rnaseq #nfcore #openscience #nextflow #bioinformatics

X-post from Bluesky:

🧑‍💻Satellite Hackathon at #ViBioM2026!

Join the #Virus #Bioinformatics + @nf_core Hybrid Collaborative #Hackathon & collaborate on bioinformatic tools and ideas & contribute to reproducible workflows & research infrastructure.

Want to write nf-core modules for virus tools? Convert viral analysis workflows to #Nextflow? Add tools to #bioconda ? Contribute VirJenDB? Or your own project?

(supported by @NFDI4Microbiota )

Register your interest 👇

https://evbc.uni-jena.de/events/vibiom2026/hackathon-satellite-event/