Mastodawn

📣 Working in #virus #bioinformatics ?! 📣

⌛ Last chance to register your interest to attend online and/or in-person the #EVBC #ViBioM2026 satellite collaborative hackathon co-organised between the VirJenDB @NFDI4Microbiota, and @nf_core

🧑‍💻 Add tools to bioconda, write a nf-core module, update VirJenDB, or propose your own project!

Register here and/or suggest a project here: https://docs.google.com/forms/d/e/1FAIpQLSeNbaJxC0pbP-4XdOMpf6uzCPmEGukMvraY6NT8ctMRrNpu0w/viewform

*Deadline* is end of this week: 17th April!

Any questions, feel free to ask @jfy133

nf-core Mar 21, 2025

Next week is the March 2025 @nf_core #hackathon! 🎉

With 44 local sites across 27 countries, this event is truly global 🌏🌏🌎

We currently have 992 people registered - so close to 1000! The good news is that there's still time to register:
https://nf-co.re/events/2025/hackathon-march-2025 🎟 ✍️

If you still need convincing, here's a little video to whet your appetite 👩🏻‍💻

Hackathon - March 2025 (Online / Distributed)

A virtual hackathon with local sites to develop nf-core together

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nf-core Jan 18, 2025

This is an exciting one - the first @nf_core pipeline for remotely sensed satellite imagery 🛰️ alongside auxiliary data. It produces a set of trend files related to land-cover changes 🌍

Congrats to Felix Kummer and team on this milestone! 🎉

More info here: https://nf-co.re/rangeland
Code: Https://github.com/nf-core/rangeland

#nextflow #nfcore #geoscience #satelliteimagery #EarthObservation #RemoteSensing

rangeland: Introduction

Pipeline for remotely sensed imagery. The pipeline processes satellite imagery alongside auxiliary data in multiple steps to arrive at a set of trend files related to land-cover changes.

nf-core Sep 18, 2024

The @nf_core Slack org passed a pretty significant milestone a few hours ago:

🎉 WE JUST HIT 10,000 SLACK USERS! 🎉

What an incredible milestone! Thank you to all of your for being part of this amazing community! 💚

nf-core Jul 2, 2024

Do you work with bioinformatics in a clinical / regulatory setting? You might be interested in the #regulatory "special interest group" that's just started in @nf_core 👩🏻‍⚕️👨🏻‍⚕️📋

The group had its kick-off meeting yesterday, with a fantastic turnout and some great discussion 💬
We put together a short highlights video with a handful of quotes below ✨ and you can catch up on the full meeting with the recording on YouTube: https://www.youtube.com/live/_hYPuzkd2H0 📺

To get involved, see https://nf-co.re/special-interest-groups/regulatory

#regulatory special interest group: kick-off

YouTube

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nf-core May 14, 2024

This section goes on to chart the experiences of the #EuroFaang consortia and the benefits of gradual adoption of #Nextflow and @nf_core.

The final result is nuanced and truthful and we hope it can provide a blueprint for other consortia.

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nf-core May 14, 2024

The second half of the paper describes the experience of the #EuroFaang consortia as they adopted @nf_core.

We cover initial motivations and hurdles, with a figure showing how maintenance of community-owned pipelines can shift over time, a true superpower of
@nf_core ✨

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nf-core May 14, 2024

In the introduction, we look into usage and citations of workflow managers. It's clear that their popularity is surging, notably those that are command-line tools.

Citations of #Nextflow have especially jumped in recent years.. 📈

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nf-core Apr 2, 2024

The @nf_core pipelines are flexible by design, meaning that different groups can run the same pipeline in multiple ways. Interest groups can help to standardise usage across fields and disciplines.

nf-core Apr 2, 2024

Today we're launching @nf_core "Special Interest Groups" - a place to discuss topics with others in your specific field(s) of research, bringing people together to collaborate in a new way.

Collaborate not just on tools, but how those tools are used 🛠️

https://nf-co.re/blog/2024/special_interest_groups

Special Interest Groups

A new place to collaborate with others working in your field

Website	https://nf-co.re
Github	https://github.com/nf-core