🧬 Can advanced sequencing technologies bring clarity to genetic variants once deemed uncertain?

🔗 Combining long-read DNA and RNA sequencing to enhance molecular understanding of structural variations leading to copy gains. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.04.031

📚 CSBJ: https://www.csbj.org/

#Genomics #StructuralVariants #LongReadSequencing #RareDisease #PrecisionMedicine #RNAseq #Nanopore #GeneticDiagnostics #NanoporeSequencing #Transcriptomics

Pipeline release! nf-core/mag v4.0.0 - mag 4.0.0 - Blue Huemul!

Please see the changelog: https://github.com/nf-core/mag/releases/tag/4.0.0

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/mag v3.4.0 - mag 3.4.0 - Green Gecko!

Please see the changelog: https://github.com/nf-core/mag/releases/tag/3.4.0

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

🧬 This study explores how nanopore sequencing transforms biochemical molecules into human-readable signals—revolutionizing how we decode protozoan genomes.

🔗 Nanopore sequencing of protozoa: Decoding biological information on a string of biochemical molecules into human-readable signals. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.01.002

📚 CSBJ: https://www.csbj.org/

#NanoporeSequencing #Genomics #DNA #RNA #Metagenomics #Protozoa

Pipeline release! nf-core/mag v3.3.1 - mag 3.3.1 - [2025-03-13]!

Please see the changelog: https://github.com/nf-core/mag/releases/tag/3.3.1

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/mag v3.3.0 - mag 3.3.0 - Red Reindeer!

Please see the changelog: https://github.com/nf-core/mag/releases/tag/3.3.0

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/bacass v2.4.0 - v2.4.0!

Please see the changelog: https://github.com/nf-core/bacass/releases/tag/2.4.0

#assembly #bacterialgenomes #denovo #denovoassembly #genomeassembly #hybridassembly #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics

Calling on people with experiment.com experience. I'll be launching an independent Archaeal seq & phylogeny project soon to make up for some budget shortfalls, would absolutely love to get feedback on goals & timeline.

Please boost if you can!

#microbiology #archaea #NanoporeSequencing #bioinformatics

Pipeline release! nf-core/mag v3.2.1 - mag 3.2.1 [2024-10-30]!

Please see the changelog: https://github.com/nf-core/mag/releases/tag/3.2.1

#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics