Pipeline release! nf-core/taxprofiler v1.2.6 - v1.2.6 - Bouncy Basenji Patch!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.6

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Release v1.2.6 - Bouncy Basenji Patch · nf-core/taxprofiler

Added #678 Included metaval.config to generat input files for genomic-medicine-sweden/metaval (added by @LilyAnderssonLee) #655 Added nf-tests for test profile (added by @sofstam) Fixed #674 Fix...

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Pipeline release! nf-core/createtaxdb v2.1.0 - v2.1.0 - Gracious Goblin - [2026-02-10]!
Parallelised and automated construction of metagenomic classifier databases of different tools
Please see the changelog: https://github.com/nf-core/createtaxdb/releases/tag/2.1.0

#database #databasebuilder #metagenomicprofiling #metagenomics #profiling #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Release v2.1.0 - Gracious Goblin - [2026-02-10] · nf-core/createtaxdb

Added #117 - Updated to nf-core/tools template 3.5.1 (by @jfy133) #143 - Documented how to resovle KrakenUniq unbound variable jellyfish issue (❤️ to @flass for suggesting, added by @jfy133) #140 ...

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Pipeline release! nf-core/ampliseq v2.16.1 - Ampliseq release 2.16.1 2026-01-23!
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.16.1

#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #metataxonomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Release Ampliseq release 2.16.1 2026-01-23 · nf-core/ampliseq

Two bug fixes plus modifications to adhere to Nextflow strict syntax. Fixed #943 - Fix SciLifeLab Figshare urls for reference databases. #942 - Nextflow strict syntax for non-nf-core-modules/workf...

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Pipeline release! nf-core/taxprofiler v1.2.5 - v1.2.5 - Bouncy Basenji Patch!
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.5

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Release v1.2.5 - Bouncy Basenji Patch · nf-core/taxprofiler

Added #640 Added support for saving Metaphlan SAM files (❤️ to @mr2raccoon for reporting and added by @jfy133) #657, #667 Template update for nf-core/tools v3.4.1 and v3.5.1 (added by @sofstam and...

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Pipeline release! nf-core/createtaxdb v2.0.0 - v2.0.0 - Charming Chaac - [2025-11-14]!

Parallelised and automated construction of metagenomic classifier databases of different tools

Please see the changelog: https://github.com/nf-core/createtaxdb/releases/tag/2.0.0

#database #databasebuilder #metagenomicprofiling #metagenomics #profiling #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Release Ampliseq Version 2.15.0 · nf-core/ampliseq

nf-core/ampliseq version 2.15.0 - 2025-10-06 Summary of changes Many issues were fixed and more control was given over QC and taxonomic classification. Detailed changes Added #909,#914 - Parameter...

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Release v1.2.4 - Bouncy Basenji Patch · nf-core/taxprofiler

Added #619 Added default pipeline nf-test (added by @sofstam) #615 Updated to nf-core pipeline template v3.3.1 (added by @sofstam) #614 Updated module krakenuniq/preloadedkrakenuniq to fix preload...

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Release detaxizer 1.2.0 - Kunschd · nf-core/detaxizer

Summary of changes filtering is set now by default defaults reflect best settings from benchmarking human decontamination improvements to memory and time requirements Detailed changes Added PR #...

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Release v1.0 - Helpful Hydra - [2025-06-19] · nf-core/createtaxdb

Added Initial release of nf-core/createtaxdb, created with the nf-core template. Adds database building support for the following tools: (Primarily) nucleotide based Bracken (added by @alxndrdiaz...

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