Pipeline release! nf-core/denovotranscript v1.2.1 - nf-core/denovotranscript v1.2.1!

Please see the changelog: https://github.com/nf-core/denovotranscript/releases/tag/1.2.1

#denovoassembly #rnaseq #transcriptome #nfcore #openscience #nextflow #bioinformatics

The #spider #Tibellus #oblongus (#Philodromidae) has a #Holarcticdistribution and is common in Central Europe, thus not being protected. It prefers #sunexposed #habitats, whether dry or moist, and is a free #hunter that is very well #camouflaged due to its elongated #bodyshape. Y. Korolkova et al. (2023) examined the #venomgland #transcriptome and a venom proteome analysis.

© #StefanFWirth #Rosenthal #Berlin 2025

Ref
Y. Korolkova et al. (2023)
https://doi.org/10.1038/s41597-023-02703-0

Photos
© S.F. Wirth

Differential gene expression during early development in recently evolved and sympatric Arctic charr morphs

old paper on the development of sympatric morphs

#arcticcharr #transcriptome #rnaseq #fish #evolution #sympatry
#peerj #biology
https://peerj.com/articles/4345/

#Microbiota transplantation offers new hope against #cotton #leaf_curl #disease.

#CLCuD #rhizosphere #phylosphere #Gossypium # #microbiome #transcriptome

https://phys.org/news/2025-03-microbiota-transplantation-cotton-leaf-disease.html

Are you ready for #EMBLEpitrans? Prepare to deep dive into advances in RNA modification functions, their key roles in gene expression, disease, and transformative therapies. Be part of the community🔬💡

📩 Submit your abstract by 5 August
🗓️ 28 – 30 October
📍 EMBL Heidelberg and Virtual
➡️ https://s.embl.org/etc25-01-ma

#EMBLEvents #geneexpression #RNAmodification #mRNA #RNA #transcriptome

Pipeline release! nf-core/denovotranscript v1.2.0 - nf-core/denovotranscript v1.2.0!

Please see the changelog: https://github.com/nf-core/denovotranscript/releases/tag/1.2.0

#denovoassembly #rnaseq #transcriptome #nfcore #openscience #nextflow #bioinformatics

Random question for #transcriptome #bioinformatics folks - is there ever a reason to screen transcriptome assemblies (lots of small contigs) against database using ANI tools (i.e. skani)?

Curious to know if there's a usage case for it.

Do or die: How #soybeans tackle #nematode invaders.

#agriculture #transcriptome #RNA

https://phys.org/news/2025-01-die-soybeans-tackle-nematode-invaders.html