Pipeline release! nf-core/ampliseq v2.16.1 - Ampliseq release 2.16.1 2026-01-23!
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.16.1
#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #metataxonomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/ampliseq v2.16.0 - Ampliseq Version 2.16.0!
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.16.0
#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #metataxonomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/ampliseq v2.15.0 - Ampliseq Version 2.15.0!
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.15.0
#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/ampliseq v2.14.0 - Ampliseq Version 2.14.0!
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.14.0
#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/ampliseq v2.13.0 - Ampliseq Version 2.13.0!
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.13.0
#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics
📰 Happy to announce the publication in @PeerCommunityJournal of our analysis of #VaginalMicrobiota dynamics.
🦠 This work provides unprecedented insights into the occurrence of #dysbioses.
Thanks to the #women participating in the #PAPCLEAR study at CHU Montpellier (France) 🙏
The model (all in #RStan) was built by @tsukushi_kamiya and the #16S sequencing of over 2.000 samples was done in Jacques Ravel's lab. This work stems from the @ERC_Research #EVOLPROOF project.
https://peercommunityjournal.org/articles/10.24072/pcjournal.527/
Heureux d'annoncer la publication dans @PeerCommunityJournal de notre analyse de la dynamique du #MicrobioteVaginal.
Ces travaux sont issus de l'étude #PAPCLEAR promue par le #CHU_Montpellier et financée par l' @ERC_Research, qui représente l'un des suivis les plus longs à ce jour.
Le magnifique modèle statistique (tout en #RStan) a été réalisé par @tsukushi_kamiya et le séquençage #16S de plus de 2000 échantillons réalisé dans le laboratoire de Jacques Ravel.
https://peercommunityjournal.org/articles/10.24072/pcjournal.527/
Pipeline release! nf-core/ampliseq v2.12.0 - Ampliseq Version 2.12.0!
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.12.0
#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/ampliseq v2.11.0 - Ampliseq Version 2.11.0!
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.11.0
#16s #18s #amplicon-sequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomic-classification #taxonomic-profiling #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/ampliseq v2.10.0 - Ampliseq Version 2.10.0!
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.10.0
#16s #18s #amplicon-sequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomic-classification #taxonomic-profiling #nfcore #openscience #nextflow #bioinformatics
nf-core
Ecology & Evolution of Health
ETE