Pipeline release! nf-core/mhcquant v3.2.0 - 3.2.0 - Solitude!
Identify and quantify MHC eluted peptides from mass spectrometry raw data
Please see the changelog: https://github.com/nf-core/mhcquant/releases/tag/3.2.0
#dda #immunopeptidomics #massspectrometry #mhc #openms #peptides #nfcore #openscience #nextflow #bioinformatics
🧬 Proteomics Workshop in Helsinki! 🇫🇮
Join us on April 30th at the University of Helsinki for an intensive day of mass spectrometry analysis. From LC-MS/MS basics to advanced DDA/DIA quantitation using OpenMS and OpenDIAKiosk.
📍 Meilahti Campus, Biomedicum 1, Sali 3
🕘 30th April - 09:00 - 17:00
💻 Note: This is a hands-on course—please bring your laptop!
🔗 https://www.denbi.de/training-courses-2026/2086-ms-analysis-with-openms-and-opendiakiosk
#Proteomics #Bioinformatics #MassSpec #OpenMS #Helsinki #UniHelsinki #Science #deNBI
Pipeline release! nf-core/mhcquant v3.1.0 - 3.1.0 - BlüBa!
Identify and quantify MHC eluted peptides from mass spectrometry raw data
Please see the changelog: https://github.com/nf-core/mhcquant/releases/tag/3.1.0
#dda #immunopeptidomics #massspectrometry #mhc #openms #peptides #nfcore #openscience #nextflow #bioinformatics
It's official, I'm attending the EuBIC-MS winter school in January. During the education day my team will will be presenting courses on #proteomics and mass spectrometry using #OpenMS in Python. There's still time to sign up: https://eubic-ms.org/events/2026-winter-school/
Join us for the EuBIC-MS Winter School 2026 – a biennial meeting focused on computational approaches for mass spectrometry–based omics. The event brings together leading scientists and early-career researchers for keynote lectures, hands-on workshops, and networking opportunities, fostering collaboration and…
Pipeline release! nf-core/mhcquant v3.0.0 - MHCquant 3.0.0 - Monrepos!
Please see the changelog: https://github.com/nf-core/mhcquant/releases/tag/3.0.0
#dda #immunopeptidomics #massspectrometry #mhc #openms #peptides #nfcore #openscience #nextflow #bioinformatics
Proud to announce our latest paper: "OpenMS WebApps: Building User-Friendly Solutions for MS Analysis".
We've been working for the last couple of years to provide an interface for people to try out the power of #OpenMS without having to install or download anything. We think the webapp concept works well for this, and with the templates we provide we also think it should be handy for folks wanting to deploy their own locally hosted apps.
Check out the paper here: https://pubs.acs.org/doi/10.1021/acs.jproteome.4c00872
#OpenScience
#opensource
#TeamMassSpec
#Proteomics
#Metabolomics
nf-core
de.NBI & ELIXIR Germany
Peter J. Jones
Dr. Sam Wein