How Computers “See” Molecules | Towards Data Science

Generative Molecular Design (Part 1): common molecular representations in data science.

Towards Data Science
Started to learn about this very interesting field, all coding problems I solve while learning it, will be on GitHub: https://github.com/youshitsune/bioinformatics
#coding #Bioinfomatics
GitHub - youshitsune/bioinformatics: A repo that contains algorithms used in bioinformatics.

A repo that contains algorithms used in bioinformatics. - youshitsune/bioinformatics

GitHub
Does anyone have experience with AlphaFold Pull-Down or other AlphaFold-based methods to find protein interactions? #Bioinfomatics #proteomics

🚀Missed the R/Biocounductor watch party @rladiesrome 🧐here are two of the talks, stay tuned for more!
- Keynote, JJ Allaire: Reproducible Manuscripts with Quarto
https://www.youtube.com/watch?v=0wB4K08ui4c&list=PLdl4u5ZRDMQRVvXBi29h7MDtRn-AQGlXS&index=12
- Short Talks, rworkflows: taming the Wild West of R packages
https://www.youtube.com/watch?v=qdwbJOpVsvU&list=PLdl4u5ZRDMQRVvXBi29h7MDtRn-AQGlXS&index=4

#rstats @bioconductor @RLadiesGlobal
#datascience #bioinfomatics

Keynote, JJ Allaire: Reproducible Manuscripts with Quarto

YouTube

Why our #biotech and #pharma clients turn into OmicsChart's champions🏆 ? Because we make sure that our results serve our clients long after handover.

Many providers treat #bioinfomatics project deliverables as the end goal. But the project doesn't end when service provision does. The true deliverable of a #bioinformatics consulting is not a table, a graph or a report, but a perspective that can be used to drive decisions 🎯

#biomarkers #oncology #immunooncology #rwe #rwd

Toolbox for tagging sensitive data in life science research

From climate change to global pandemics, the world is facing major environmental and health-related challenges that are driving life science research institutions to pool their data and digital resources in search of solutions.

Phys.org

#introduction
Here we go!
I freshly joined Daniel Croll's team as a #PhD student, at #unineuchatel.
I'm mainly interested about #epigenetics, #transposons, #genomics and #evolution in a #plantpathogen context.
Love to #climb, do some #kayak and hike, but also draw and make some #vulgarisationscientifique/#popularscience!

Would love to see more about:
#Bioinfomatics, #ngs, #sequencing, #hostpathogen, #plants, #fungi, #nextflow & #python

It is a bit weird how I am too #PopGen or #Bioinfomatics for ecoevo people but too #Biodiversity for genomic people. I am starting from #Conservation #Biology though, so the ecoevo instance is a bit more homey with all those censored insect pictures 🥰

Not sure if I should ask here or the other instance... : Does anyone here use strelka2 for variant calling? I love how it have its own python script to write the regional parallelization for you and can run really fast but starting to wonder why it is not used more in the #ConservationGenomics or #AnimalGenetics as opposed to GATK HaplotypeCaller.

#Genomics #WGS #Bioinfomatics #CompBio #PopulationGenomics

Okay, I'm calling it.

Looking through just ecoevo.social & genomic.social alone (let alone all the other sciencey instances, shoutout to fediscience.org , sauropods.win , qoto.org, scicomm.xyz ...), >90% of the science twitter I care about has at the very least made a profile here in the fediverse. Well done folx!

#ScienceTwitter #Science #Ecology #Evolution #Bioinfomatics #TwitterMigration