Pipeline release! nf-core/ampliseq v2.16.1 - Ampliseq release 2.16.1 2026-01-23!
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.16.1

#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #metataxonomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Release Ampliseq release 2.16.1 2026-01-23 · nf-core/ampliseq

Two bug fixes plus modifications to adhere to Nextflow strict syntax. Fixed #943 - Fix SciLifeLab Figshare urls for reference databases. #942 - Nextflow strict syntax for non-nf-core-modules/workf...

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Release Ampliseq Version 2.15.0 · nf-core/ampliseq

nf-core/ampliseq version 2.15.0 - 2025-10-06 Summary of changes Many issues were fixed and more control was given over QC and taxonomic classification. Detailed changes Added #909,#914 - Parameter...

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#18S | L'equip tècnic de la XES i altres entitats del Grup Ecos hem aturat l'activitat al migdia i hem sortit al carrer per sumar-nos a la jornada de lluita contra el genocidi i per la llibertat del poble palestí

📢Cridem a participar aquest vespre a les mobilitzacions convocades arreu del país #FreePalestine

Release Ampliseq Version 2.14.0 · nf-core/ampliseq

nf-core/ampliseq version 2.14.0 - 2025-05-23 Summary of changes Multi-region analysis is now easier with custom databases, parameters were changed or added Updated sbdi-gtdb, gtdb, PR2 databases a...

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Release Ampliseq Version 2.13.0 · nf-core/ampliseq

nf-core/ampliseq version 2.13.0 - 2025-04-04 Summary of changes Zenodo changed from zenodo.org/record to zenodo.org/records and some taxonomic databases could not be downloaded any more Add most r...

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Release Ampliseq Version 2.12.0 · nf-core/ampliseq

nf-core/ampliseq version 2.12.0 - 2024-11-15 Summary of changes updated some reference databases several bug fixes updated to nf-core template 3.0.2 dependency updates Detailed changes Added #78...

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Pipeline release! nf-core/ampliseq v2.11.0 - Ampliseq Version 2.11.0!

Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.11.0

#16s #18s #amplicon-sequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomic-classification #taxonomic-profiling #nfcore #openscience #nextflow #bioinformatics

Release Ampliseq Version 2.11.0 · nf-core/ampliseq

nf-core/ampliseq version 2.11.0 - 2024-08-06 Summary of changes This update is mostly about reference taxonomy databases: added reference databases sbdi-gtdb=R09-RS220-1 for DADA2 added reference ...

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EUKARYOME: the rRNA gene reference database for identification of all eukaryotes

Abstract. Molecular identification of micro- and macroorganisms based on nuclear markers has revolutionized our understanding of their taxonomy, phylogeny

OUP Academic