You know you're still needed as a bioinformatician when people keep sending you Word documents with code in them. 😅
Lorena Pantano
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- 31 Posts
Head of CompBio at NextRNA. Working on RNA biology. Fighting for equality. Donate $1: http://danafarber.jimmyfund.org/goto/lopantano 🏳️🌈 👊🏿🖤 Fw: http://bit.ly/bwoinbio
Using seqera AI to understand nextflow.log, actually it told me where in the nextflow script was the error and I could see the problem was my samplesheet names. I would say this is even a better usage of AI :) @seqera #chipseq @nextflow.io @nf-co.re #troubleshooting to 2min #bioinformatics
nf-core⏰ A small reminder about the nf-core survey - thank you to everyone who the >170 people people who have responded so far!
✒️ If you've not yet responded, please take 5 minutes to fill in this very short survey to give us feedback on anything nf-core - what's working well, and what's not - for both users and developers!
🗣️ We will present a summary of results during the upcoming March hybrid nf-core hackathon!
🎙️Listen to this insightful podcast about current Generative LLM technology. It covers how it behaves with edge cases and when data is insufficient, and clarifies difficult-to-remove biases. These biases affect fields like life-science R&D, the most. #LLM #Biotech
https://podcasts.apple.com/us/podcast/short-wave/id1482575855?i=1000693168846
https://podcasts.apple.com/us/podcast/short-wave/id1482575855?i=1000693168846
📊 An interesting study highlights how our reliance on thresholds for gene expression data could lead us to:
• Miss promising new targets 🎯
• Invest resources in suboptimal candidates 💸
#Genomics #Bioinformatics #ResearchInnovation #DataScience
Source: https://www.biorxiv.org/content/10.1101/2025.01.31.635902v1.full.pdf
Davide RissoIf you’re interested in learning more about single-cell and spatial transcriptomics and proteomics, join us for CSAMA 2024 in the beautiful Italian Alps! Spend a week with myself @csoneson @mikelove @lgatto @whuber and many others not on Mastodon to learn data science, Bioconductor software and more! Registration info at https://csama2024.bioconductor.eu/
Bioconductor🚀 Boost Your Bioinformatics Skills!
Join us for the Bioconductor Carpentries RNA-Seq Analysis Workshop!
📅 July 22-23, 2024
📍 Grand Rapids, MI
🔍 Who: Biologists and researchers with some R experience
💡 Why:
- Hands-on Bioconductor training
- Expert instructors
- Networking opportunities
👉 Register now! https://buff.ly/3VdEjj2
#Bioinformatics #Bioconductor #RStats #Carpentries #BioC2024
it took me a little bit to figure out this for better debugging in python with pdb: !import code; code.interact(local=vars()) 😜 #python