Mastodawn

ESCMID Sep 22, 2025

We wrapped up #IMMEM XIV over the weekend and it was a fantastic success with over 250 participants from 35 countries. A big thank you to the organisers and specifically ESGEM our study group on epidemiological markers! The content will be available on ESCMID media soon.

Samuel Lampa Sep 19, 2025

Registered too late for a poster for @ESCMID #IMMEM #IMMEMXIV but happy to discuss SciCommander with anyone interested 😊 See: https://livesys.se/posts/rewrite-of-scicommander-in-go/

Captures provenance of ad-hoc commands while skipping already computed steps - "The benefits of a pipeline tool without the pipeline tool".

End goal is to integrate provenance tracking across pipeline tools and the inevitable ad-hoc analyses done on the results of the pipeline runs.

Nabil-Fareed Alikhan Sep 19, 2025

Come see my poster at #IMMEM XIV Poster 151.

🔬 QualiBact – provides robust, data-driven QC thresholds for 304 bacterial species, built from >2.4M assemblies (AllTheBacteria + RefSeq).
⚙️ SpecCheck – an open-source command-line tool that applies these standards using existing outputs (QUAST, CheckM, ARIBA, Sylph) to generate clean, reproducible QC reports.

https://happykhan.github.io/qualibact/species/

https://github.com/happykhan/speccheck

ESCMID Sep 19, 2025

We are on to day 3 of the #IMMEM conference in Porto after some great talks and the first poster session featuring the research that's being done by our community! Today we'll be covering environmental surveillance for #ID and #AMR and how best to share pathogen data. #IDsky #clinmicro

ESCMID Sep 18, 2025

Day 1 of the #IMMEM XIV conference is in the books! Today we will cover implementation of genomics as it helps to support public health and inform on vaccine strategy as well as what’s new in bioinformatics. #MicrobialTyping #Genomics #clinmicro #IDSky

Nabil-Fareed Alikhan Sep 17, 2025

If you're at #IMMEM XIV . please come by and see "my" poster on vaccines.watch

Otherwise please read the preprint.

https://www.biorxiv.org/content/10.1101/2025.06.13.659488v1

ESCMID Sep 10, 2025

🧠 Straight from the conference chair, Natacha offers what she is looking forward to most at #IMMEM XIV. Review the programme: https://ow.ly/ucIc50WNoeA

🚀 With only one week left, secure your spot at this conference today! Register now: https://ow.ly/rLhU50WNoeC

ESCMID Sep 7, 2025

🧠 Straight from the programme committee treasurer, Sylvain offers what he is looking forward to most at #IMMEM XIV. Review the programme: https://ow.ly/ucIc50WNoeA

🚀 With only 10 days left, secure your spot at this conference today! Register now: https://ow.ly/rLhU50WNoeC

ESCMID Sep 2, 2025

🧠 Straight from one of the programme committee members, Ana offers what she is looking forward to most at #IMMEM XIV. Review the programme: https://ow.ly/ucIc50WNoeA

🚀 There's only 2 weeks left, secure your spot at this conference today! Register now: https://ow.ly/rLhU50WNoeC

ESCMID Aug 17, 2025

🚀 There's only 1 month left until #IMMEM XIV kicks off! Dive into topics from how genomics inform resistance profiling to pathogen surveillance in a #OneHealth framework.

🧬Register today & don't miss out: https://ow.ly/njlX50WGwm1