de.NBI & ELIXIR Germany

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The de.NBI network provides bioinformatics services and comprehensive compute resources to researchers in the life sciences and biomedicine in Germany and Europe. Since August 2016 the German Node of ELIXIR, ELIXIR Germany, is run by de.NBI partners.

๐Ÿงฌ Proteomics Workshop in Helsinki! ๐Ÿ‡ซ๐Ÿ‡ฎ

Join us on April 30th at the University of Helsinki for an intensive day of mass spectrometry analysis. From LC-MS/MS basics to advanced DDA/DIA quantitation using OpenMS and OpenDIAKiosk.

๐Ÿ“ Meilahti Campus, Biomedicum 1, Sali 3
๐Ÿ•˜ 30th April - 09:00 - 17:00
๐Ÿ’ป Note: This is a hands-on courseโ€”please bring your laptop!
๐Ÿ”— https://www.denbi.de/training-courses-2026/2086-ms-analysis-with-openms-and-opendiakiosk

#Proteomics #Bioinformatics #MassSpec #OpenMS #Helsinki #UniHelsinki #Science #deNBI

๐Ÿงฌ DNA Day is tomorrow, April 25! A perfect time to think about sequence data.

Our Nanopore workshop (30 June โ€“ 2 July) takes you from library prep to (meta)genome assemblies and MAGs. No prior bioinformatics experience required.

๐Ÿ”— https://www.denbi.de/training-courses-2026/2071-nanopore-sequencing-101-from-library-prep-to-genomics-and-metagenomic-analysis

#DNADay #Bioinformatics #Nanopore #Bielefeld #LifeScience #Metagenomics

๐Ÿš€ Call for Projects: BioHackathon Germany 2026! ๐Ÿงฌ

Project submission is now OPEN! Weโ€™re looking for impactful project ideas from all areas of the #LifeSciences. We want your innovation!

๐Ÿ“ The Details:

Submit by: 15 July 2026

Length: Max 500 words

Focus: Align with de.NBI (ELIXIR Germany) topics.

Format: At least 2 project leads per application.

๐Ÿ”— For more information see: https://www.denbi.de/de-nbi-events/2051-5th-biohackathon-germany

Letโ€™s solve bioinformatics challenges together! ๐Ÿ’ปโœจ

#BioHackathon #Bioinformatics

โœจWeโ€™re excited to announce Stephanie Hicks as another guest speaker for the Galaxy Training Academy 2026!

Stephanie is known for her leadership in the Bioconductor community and her advocacy for best practices in data analysis, mentoring, and inclusive scientific training.

Join us May 18โ€“22 for a free, virtual week of learning with the Galaxy community, and stay tuned for more guest speaker announcements!

Register here: gxy.io/GTA2026-info

Great experience at #ClusterKonferenz2026! @deNBI services, training, cloud, and industry forum were presented in the seminar "cooperations in difficult times". A lot of networking at the de.NBI booth! Thanks to Patrick Guidato and team for a fantastic conference!
For more information on the cluster conference: https://www.medizin.nrw/veranstaltungen/clusterkonferenz-2026-spitzenmedizin-aus-nrw-in-deutschland-europa-und-der-welt/
About the de.NBI Industry Forum: https://www.denbi.de/industrial-forum
About de.NBI service portfolio: https://www.denbi.de/services
Photo by DLR Fotomedien, M. Soppa

๐Ÿงฌ de.NBI Summer School 2026: Bioinformatics for Proteomics ๐Ÿงฌ

Master mass-spec data analysis in Bochum! From peptide ID to advanced topics like ML, Single-cell, and Metaproteomics.

๐Ÿ“ Where: RUB, Bochum, Germany
๐Ÿ“… When: 07โ€“11 Sept 2026
๐Ÿ› ๏ธ Tools: pyOpenMS, msAmanda, Proteobench
๐ŸŽ“ Target: PhDs & Postdocs (Python basics required)
๐Ÿ‘ฅ Trainers: International experts from across Europe

๐Ÿ”— Apply by 01.06.2026: https://www.denbi.de/training-courses-2026/2075-de-nbi-summer-school-2026-bioinformatics-for-proteomics

๐Ÿงฌ Service of the week:
Helixer โ€“ the deep learning powerhouse for accurate gene prediction in eukaryotic genomes. ๐Ÿš€

๐Ÿค– High Accuracy: Leveraging deep learning for precise predictions.
๐ŸŒ Diverse Taxa: Robust performance across a wide range of species.
๐Ÿ› ๏ธ User-Friendly: Minimal manual tuning required to get results.
๐ŸŽ“ Academic Access: Free for life scientists in academia!

Step into the future of genomics. ๐Ÿงฌโœจ

https://www.denbi.de/services-according-to-service-centers/1996-helixer-deep-learning-based-gene-prediction-for-eukaryotic-genomes

#Bioinformatics #Genomics #DeepLearning #OpenScience

๐Ÿš€ Bridging Gaps Between Research & Industry ๐Ÿค

Are you working on the future of Cloud Security? Join us in Berlin for the de.KCD Industry Forum!
๐ŸŒ What to expect:
In-depth dialogue on successful collaborations and the latest shifts in:
โœ… Secure Data Management ๐Ÿ’พ
โœ… Secure Processing Environments ๐Ÿ›ก๏ธ
โœ… Secure Infrastructure ๐Ÿ—๏ธ
โœ… Secure Use of AI ๐Ÿค–

๐Ÿ“ Location: Berlin
๐Ÿ“… Date: June 18, 2026
๐ŸŽŸ๏ธ Register here: https://events.hifis.net/event/3676/

#CloudSecurity #DataSecurity #CyberSecurity #AI #Infosec #deKCD

๐Ÿ“Œ DatenHorizonte #26: Research Data Management in the Life Sciences

FDM in den Life Sciences heiรŸt vernetzte Infrastrukturen, groรŸe Datenmengen und deren praktische Umsetzung.

Helena Schnitzer und Nils-Christian Lรผbke, Forschungszentrum Jรผlich (@fzj), geben Einblicke in de.NBI und ELIXIR Germany (@deNBI) mit Fokus auf bioinformatische Infrastrukturen und die de.NBI Cloud.

๐Ÿ—“๏ธ 11. Mai 2026 | 16:15โ€“17:15 Uhr
๐Ÿ•’ 16:15โ€“17:15 Uhr
๐Ÿ’ป https://uni-kiel.zoom-x.de/j/65691606217

Weitere Infos: https://fdm-sh.de/veranstaltungen/research-data-management-rdm-in-life-science-insights-from-the-de.nbi-elixir-germany-network/

๐Ÿงฌ Interested in genome assembly? Take a deeper dive at GTA 2026. Join us May 18โ€“22 for a free, virtual, asynchronous week of hands-on Galaxy training and support from the community.

Learn more and register: https://training.galaxyproject.org/training-material/events/2026-05-18-galaxy-academy.html#overview

Galaxy Training Academy 2026

The Galaxy Training Academy is a self-paced online training event for beginners and advanced learners who want to improve their data analysis skills in Galaxy and/or in popular fields in bioinformatics. Over the course of one week, we offer a diverse selection of learning tracks for you.

Galaxy Training Network