Would you like to confirm your cloning success with full plasmid sequencing?
NanoPlasmiQC allows automatic analysis of dozens of plasmids in a single ONT sequencing run. If you would like to test it with your own plasmids, read more in the preprint and feel free to reach out:
https://doi.org/10.64898/2026.04.01.715842
#Genomics #Bioinformatics #OpenScience #Biotechnology #SynBio #iGEM
@PuckerLab
🌱🐣 Happy Easter from our Plant Biotechnology & Bioinformatics Group! 🧬
Celebrating renewal, curiosity, and the hidden “Easter eggs” in biological data 🧪💻
🌿 Happy Easter! 🌼
https://www.izmb.uni-bonn.de/en/pbb
@boas_pucker
@samnm
One year at Uni Bonn after moving from TU Braunschweig — time really flies! A year full of exciting research, fresh ideas, and strong growth for our group. Grateful for amazing collaborators and supporters along the way. 🚀
On to an even more exciting year ahead!
https://www.pbb.uni-bonn.de
Interested in the genetic secrets of your favorite plant?
A genome sequence might reveal them. We wrote down a workflow from DNA extraction & sequencing to genome sequence assembly & annotation. It includes a hands-on guide with example commands.
Excited about plant pigments? Anthocyanin biosynthesis is a hot topic in plant biology, judging by the growing number of publications #FlavonoidFriday
https://doi.org/10.20944/preprints202603.2058.v1 & https://shorturl.at/Hrm4c
Excited about plant pigments? Anthocyanin biosynthesis is a hot topic in plant biology, judging by the growing number of publications #FlavonoidFriday
https://doi.org/10.20944/preprints202603.2058.v1 & https://shorturl.at/Hrm4c
Completing "Plant Bioinformatics" 🌱
Students worked with CLI, big data, and cloud computing (thanks to de.NBI). Critically assessed papers and reproduced analyses. Alarming how often methods are incomplete or data is not shared. Teaching #OpenScience is crucial.
🔗 https://github.com/bpucker/teaching
Completing "Plant Bioinformatics" 🌱
Students worked with CLI, big data, and cloud computing (thanks to de.NBI). Critically assessed papers and reproduced analyses. Alarming how often methods are incomplete or data is not shared. Teaching #OpenScience is crucial.
🔗 https://github.com/bpucker/teaching
This week, I teach the students of WBIO-A-08 how to use the CLI. Currently they are having a lot of fun with piping 😈
They already learned how to create a @deNBI VM, transfer files, install tools via apt, and how to use a lot of small helpful utilities. In the next days some more bioinformatics orientated tools will follow.
PuckerLab
Samuel Nestor Meckoni