Accelerating Molecular Simulations with Triton: Fused GPU Kernels for TensorNet Neural Potentials

#Triton #CUDA #MolecularDynamics #MD #MolecularSimulations #PyTorch #Chemistry #Biology

https://hgpu.org/?p=30453

Accelerating Molecular Simulations with Triton: Fused GPU Kernels for TensorNet Neural Potentials

Molecular dynamics (MD) simulations are essential for understanding molecular behavior in biology and chemistry, but remain computationally expensive at the scales required for drug discovery and m…

hgpu.org

In the last part of Aron's molecular simulations series, we dive into the nitty-gritty of training molecular models, including how to obtain the training data. Don't miss Aron Jansen's insights on potential caveats! #modelling #molecularsimulations

Read Aron's blog here:
https://blog.esciencecenter.nl/molecular-simulations-using-machine-learning-part-3-4dd964ce8b40

Molecular Simulations using Machine Learning, Part 3

In the first part of this series we looked at the physics of simulating molecules, and went from quantum mechanics to something that is more efficient to solve, namely density functional theory and…

Netherlands eScience Center

Are you a scientist interested in designing machine learning models? Check out part 2 of Aron Jansen's series on using machine learning for molecular simulations! Aron walks through the design process step-by-step, offering insights for scientists in any field. #MachineLearning #MolecularSimulations

https://medium.com/@aronpjansen/1d647acd242c?source=friends_link&sk=04e5347c9dfe940568ab9edb98773ee1

Molecular Simulations using Machine Learning, Part 2

In this post, I will walk through the process of designing a model used in molecular simulations, from essential to state of the art. This is the second part of a series on using machine learning for…

Netherlands eScience Center

date: 2023-04-04 09:19:56
by: Yasaman Karami

Are you interested in protein-RNA complexes? We have an open #PhDposition on developing deep learning methods to understand the dynamic behaviour of these systems. Deadline: May 9, 2023. See: https://recrutement.inria.fr/public/classic/fr/offres/2023-05932
#deeplearning #molecularsimulations #compchem

🐦🔗: https://twitter.com/twitter/statuses/1643181597292724226
#PhdPosition

PhD Position F/M Elucidating conformational dynamics of protein-RNA complexes

Offre d'emploi Inria

Inria
Interested in antibiotic resistant bacteria? Want to learn #microbiology, combined w/ #molecularsimulations & #structuralbiology? We have a fully funded @NLD_BBSRCDTP open now to study #Cdiff #BugSlayer https://www.findaphd.com/phds/project/piercing-the-armour-c-difficile-s-layer-permeability/?p150321
Find out more about our lab https://salgadolab.org/ and our work on S-layer https://www.nature.com/articles/s41467-022-28196-w
Pls share!
Piercing the armour: C. difficile S-layer permeability at Newcastle University on FindAPhD.com

PhD Project - Piercing the armour: C. difficile S-layer permeability at Newcastle University, listed on FindAPhD.com

www.FindAPhD.com

My current work is on "#ClayMinerals as sorbents for #HydrophobicOrganicChemicals - #ClayHOC" at #JLUgiessen together with my colleagues Martin Gerzabek, Daniel Tunega, and Peter Grancic from #BOKU Vienna.

Funding by #DFG and #FWF is highly acknowledged.

#adsorption #spme #pollutants #MolecularSimulations

https://gepris.dfg.de/gepris/projekt/443637168?language=en

DFG - GEPRIS - Clay minerals as sorbents for Hydrophobic Organic Chemicals (ClayHOC)

Hydrophobic organic chemicals (HOCs), such as halogenated aromatic hydrocarbons, may be highly persistent in the environment and cause harmful effects on ...