I'm assembling a denovo genome of a new pseudomonadota (ONT r10), and barrnap is consistently unable to resolve the 5S site(s) from what should be a fully circularized and decently polished output. Based on the 16S and 23S hits there should at least be 3 5S.

What could be happening here? 🤔

#microbiology

Teaching Assistant or Associate Professor

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#FungalFact 34:

I just shared a video on #Kurokawia palmulata. For almost 200 years, it was known under the wrong name, and only recent DNA work revealed its real place. A simple #lichen, but a good reminder of how our understanding changes over time. 🍃

https://youtube.com/shorts/xfl2drvEOuY?si=Z-8K5NQGTwapx4DT

#mycology #fungi #lichens #Mushrooms #FungiFriday #Education #phdone #Forest #foraging #academia #DNA #nature #science #microbiology #biology #ecology #YouTube #LichensFromAtoZ #lichenology #botany #Moss

K- Kurokawia palmulata. Shaggy fringe lichen. Lichens: Form A to Z

YouTube

🧫 What secret molecular choreograph helps bacteria stay resilient against antibiotics and detergents?

🔗 Coordinated subdomain movements of MlaC regulate ligand binding and transport. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.05.031

📚 CSBJ: https://www.csbj.org/

#Microbiology #AntibioticResistance #MembraneBiology #StructuralBiology #ComputationalChemistry #MolecularDynamics #ComputationalBiology #Biophysics #ProteinStructure #DrugDiscovery #MolecularDocking

Any #archaea lab out there interested in having their Natrialba species sequenced on ONT r10 up to about 3Kx read depth for free? I'll send back annotated assembly, methylation data and raw signal files. I need at least one more species for a paper from a particular phylogenetic clade within the genus.

Please feel free to DM & boost!

#microbiology #collaboration #sequencing #bioinformatics

Harmful #algal blooms in #lakes and #reservoirs are explosions of cyanobacteria, often referred to as blue-green algae. #Microscopic #organisms ubiquitous in all types of water around the globe, cyanobacteria use sunlight to make their own food and in warm, nutrient-rich environments can quickly multiply
#Microbiology #Phycology #sflorg
https://www.sflorg.com/2025/11/mcb11112501.html
New analysis yields clearer picture of toxin-producing blue-green algae blooms

Microcystin is a recognized liver toxin and potential liver carcinogen, while cylindrospermopsin can affect multiple organs

Short-Term Microbiology Contractor (Tucson, AZ – 17 days – paid)

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Scientists at the University of Vienna discovered MISO bacteria that “breathe” iron to detoxify sulfide—reshaping our understanding of global sulfur & iron cycles and offering hope against ocean dead zones. #Microbiology #ClimateScience #DeadZones
🔗 https://www.nature.com/articles/s41586-025-09467-0?utm_source=mastodon&utm_medium=social&utm_campaign=fedica-Autoposting
Microbial iron oxide respiration coupled to sulfide oxidation - Nature

Genomic and biochemical analyses of prokaryotic sulfur metabolism identify diverse microorganisms with the capacity to oxidize sulfide using iron(iii).

Nature
Aseptic Technique: Prevention and Control of Infection

  Understanding Aseptic Technique in Modern Healthcare Aseptic technique is a systematic method used in healthcare, surgical, and laborat...

ExploreSphere - Sphere=world
Staphylococcus saprophyticus — Novobiocin Resistance and UTI in Young Women

Explore Staphylococcus saprophyticus, a novobiocin-resistant, coagulase-negative staphylococcus causing urinary tract infections in sexually active young women.

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