96 Followers
217 Following
667 Posts

scholar and teacher of all things tiny - microbiologist

postdoc in #microbiology, based in #Münster (Germany), formerly postdoc in Bill Mohn's lab @UBC Vancouver

Private account: @Jo_o

searchable by tootfinder

GitHubhttps://github.com/Holert
Reasearchgatehttps://www.researchgate.net/profile/Johannes-Holert
Google Scholarhttps://scholar.google.com/citations?user=JzgMGa8AAAAJ&hl=en
Pronounhe/him

Happy to see our newest publication out in Water Research https://doi.org/10.1016/j.watres.2026.126123

We establish bacteria from the genus Novosphingobium as model organisms to study bacterial mechanisms for removing #micropollutants in activated carbon filters.

#bacteria #microbiology #wastewatertreatment #wastewater #cleanwater

I've got a quick question for the friendly microbiologists of Mastodon.

It's my understanding that it's common for some environmental change to wipe out 90+% of a bacterial colony, only to have the survivors quickly multiply back to their original numbers, this time with a mutation that grants resistance to whatever the threat was.

Is there a name for this phenomenon (not "gene fixation," but the die back and recovery)? Are there canonical papers about it?

EDIT: I think "population bottleneck" is the best way to describe what I mean, though I got a few other very good suggestions for related terms.

Thanks everyone! You guys are the best. ❤️

#microbiology #bacteria

Population bottleneck - Wikipedia

For #MountainMonday this week I have a photograph of clouds clearing on the side of Mount Cheam (Lhílheqey) in Chilliwack, British Columbia, Canada.

#Landscape #LandscapePhotography #Nature #NaturePhotography #Chilliwack #BritishColumbia #Photography #Photo #Canada

J. #CraigVenter, Scientist Who Decoded the #Human #Genome, Dies at 79
A risk-taking outsider, he brought speed, competition and controversy to one of science’s biggest races.
Dr. #Venter, a risk-taker and intense competitor, made a bold move when he decided that the #HumanGenomeProject, a $3 billion government program for decoding the human genome, was moving slowly enough that he could enter the race late and beat it with a much faster method.
https://www.nytimes.com/2026/04/30/science/j-craig-venter-dead.html
https://archive.ph/ACJEt
J. Craig Venter, Scientist Who Decoded the Human Genome, Dies at 79

A risk-taking outsider, he brought speed, competition and controversy to one of science’s biggest races.

The New York Times

Gut Respiration

Noteworthy — A surprisingly high number of respiratory reductases were found in some gut bacteria.

https://smallthingsconsidered.blog/schaechter/2026/04/gut-respiration/

Heute ist Sperrmüll-Abfuhr im Kreuzviertel und einige Fahrräder wurden bereits mit einem Band gekennzeichnet.

Was ist Schrott und was ist nicht?

Im Bild seht ihr den geplanten Vorgang, Bild von der Stadt MS:
„kleinere Schäden reichen nicht aus“ Aha 👀

Klar ist, es steht viel Schrott herum. Auch Autos.

#münster #kreuzviertel #fahrradstadt #sperrgutabfuhr #schrottfahrräder

This is my yogurt protocol if you're curious. I clearly need to update it because I started making Greek yogurt too. https://microbialmenagerie.com/a-microbiologists-guide-to-yogurt-instant-pot-yogurt-recipe/
A Microbiologist’s Guide to Yogurt + How to Make Yogurt in the Instant Pot [Recipe]

Last year, I made 26 batches of homemade yogurt and ate probably over 350 yogurt and granola breakfasts (or some variation of that). Since I left the world of laboratory bench work, the kitchen has…

The Microbial Menagerie
Heute gab es was zu feiern. Das Zentrum für Interdisziplinäre Nachhaltigkeitsforschung #ZIN der @uni-muenster.de wird 10 Jahre alt. Zum Festsymposium gab es ein spannendes Programm mit interdisziplinären Diskussionrunden rund um #Nachhaltigkeit, z.B. zum Thema „Wächst die Zukunft nach? Bioökonomische Strategien und Risiken für Landwirtschaft, Nahrungssicherheit und nachhaltige Rohstoffkreisläufe“. Nur zusammen geht es voran im Thema Nachhaltigkeit. Alles Gute ZIN

👋 We had a successful and fun conference at #vaam2026 together with our partners and collaborators @deNBI and @dsmz !

🙏 Thank you to all our booth visitors for the interesting questions and thought-provoking discussions. Talk to you soon about more free-of-charge tools, services and best practices for microbiology data and analysis.

👉 See you at other events soon: https://nfdi4microbiota.de/newsroom/events/

#microbiology #microbes #rdm #NFDIrocks

📢 Are you at #vaam2026 ?

👉 Stop by the NFDI4Microbiota booth to learn how we can support you with training, data analysis, and making your microbiome research easier to share, reuse, and scale.

And don’t miss today’s panel discussion at 1:30 in Lecture Hall B!

We’d love to meet you 👋!

#microbiology #microbes