Bioinformatics trainers, here's the review on SAM/BAM format you wanted for your workshops :)
https://academic.oup.com/bib/advance-article/doi/10.1093/bib/bbad320/7259568?login=true
3. https://www.thelancet.com/journals/lancet/article/PIIS0140-6736(23)00775-4/fulltext - plasma mcfDNA was used in monitoring the first pig-to-human heart transplant patient, detecting reactivated porcine cytomegalovirus early post-transplant, which likely contributed to the transplant rejection.
Three new papers on #mcfDNA (microbial cell free DNA) as a diagnostic tool in infectious disease and beyond!
1. https://academic.oup.com/jid/advance-article-abstract/doi/10.1093/infdis/jiad255/7219651 - sequencing of plasma mcfDNA can detect fungal infections 3 weeks before standard of care in transplant patients
#healthcare #diagnostics #microbiology #infectiousdisease #transplant #Karius
Plasma microbial cell-free DNA (mcfDNA) sequencing identified pathogenic molds up to three weeks before clinical diagnosis of pulmonary invasive mold infections
Doing a test here to see how much reach this #mastodon account with 550 followers has compared to the same test on #Threads with a 430 Follower count.
I suspect I already know the answer.
If you see this please Boost and Like, and if you want to leave a comment feel free to that.
FINAL UPDATE - 4 Days Later
Mastodon
Likes: 3,200+
Boosts: 2,600+
Replies: 150+
Followers gained: 225
Threads
Likes: 17
Retweet/Boosts: Unknown. No stats
Replies: 4
Followers Gained: 330
I am trying to use Preseq to estimate the unique sequence richness using pop_size on a low input library that has been highly amplified by PCR. I am concerned that the high rate of PCR duplicates c...
A draft of the human pangenome with 47 assemblies representing 13 populations https://www.nature.com/articles/s41586-023-05896-x
Interested to know more about the toolset associated with pangenome analysis 🧐
Andrea Telatin
Philipp Bayer
darkufo
Andrew Heiss 