Richard Harrison

143 Followers
231 Following
24 Posts
Shared confirmation - Twittodon.com - Connect your Twitter and Mastodon accounts and verify it!

This is my account on Mastodon - Harryinashed_at_mstdn.science - verified by @[email protected] http://Twittodon.com
Twittodon.com - Connect your Twitter and Mastodon accounts and verify it!

This is my account on Twitter - twitter.com/Harryinashed - verified by @twittodon https://Twittodon.com
Twittodon.com - Connect your Twitter and Mastodon accounts and verify it!

ERC grants are the most prestigious funding schemes for basic science in Europe.

While most successful ERC applications are guarded as business secrets, this site includes a series of openly available proposals: https://www.ffg.at/europa/heu/erc/published-proposals

#Sociology #Funding #ERC #Grants #AcademicChatter

List of ERC Proposals published online by ERC Principal Investigators | FFG

PhosphoLingo: protein language models for phosphorylation site prediction https://www.biorxiv.org/content/10.1101/2022.11.28.518163v1?med=mas

Having run my own test mastodon server, I can tell you that boosting is REALLY important. That's how posts propagate between servers that are not federated together.

I may get a bit technical, and it can be hard to describe but it's something like this:

Let's say that you have 2 servers, A and B that are not connected. They have their own federated timelines that is vastly different.

let's assume they have their users @a@A and @b@B that are mutuals. If user @a@A sees something interesting on theirs federated timeline and boosts it, user @b@B will see that on their own home page. But more importantly server B will now know about and download that post, and everyone else on B server will be able to see that post on their own federated timeline!

And that's why you boost, guys! It helps posts to spread.

#FediTips

Some intriguing news from the Oak Ridge National Laboratory about new way to use the betalain-based RUBY marker in Arabidopsis and poplar.

Check "Split selectable marker mediated gene stacking in plants" in @biorxivpreprint
👉https://doi.org/10.1101/2022.11.19.517202

btw if you want to know more about RUBY marker see here
👉https://zhaolab.biosci.ucsd.edu/ruby/

⁉️Want to learn how to apply deep learning methods in Population Genomics and Phylogeography⁉️

👀Then, have a look at our course with Manolo Perez and @MatteoFumagalli in February: https://physalia-courses.org/courses-workshops/deep-learning-in-popgen/

#popgen #MachineLearning #Genomics #Bioinformatics #DeepLearning

Machine and Deep Learning methods in population genomics and phylogeography

31 March-3 April 2025 To foster international participation, this course will be held online

physalia-courses

#NewPaper — how does #HGT affect #microbiome dynamics and stability?

Using models + experiments we show that mobile resistance genes generally increase microbiome stability. But effects can differ markedly for donors and recipients of mobile genes and also depends on how species interact — sometimes causing entirely opposing effects on the stability of different species

#AMR #Plasmid

@PLOSBiology

https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3001847

Horizontal gene transfer and ecological interactions jointly control microbiome stability

What is the impact of resistance genes and their mobility on the dynamics of microbial communities? This study develops and tests a new body of eco-evolutionary theory to explore how ecological interactions and horizontal gene transfer combine to shape microbiome stability.

*slendr*
Very cool tool for spatio-temporal population genomic simulations on geographic landscapes, just out this sept2022 by Petr et al.
bioRxiv article https://www.biorxiv.org/content/10.1101/2022.03.20.485041v3

Then, look at the cool R-lib associated : https://www.slendr.net/