Michael Brockhurst

@BrockhurstLab@ecoevo.social
770 Followers
557 Following
242 Posts
Evolutionary microbiology | Experimental evolution | University of Manchester

Collective protection against the type VI secretion system in bacteria

@ISMEJournal by @Prokaryota and @willpjsmith from Kevin Foster lab

https://www.nature.com/articles/s41396-023-01401-4

Collective protection against the type VI secretion system in bacteria - The ISME Journal

Bacteria commonly face attacks from other strains using the type VI secretion system (T6SS), which acts like a molecular speargun to stab and intoxicate competitors. Here we show how bacteria can work together to collectively defend themselves against these attacks. This project began with an outreach activity: while developing an online computer game of bacterial warfare, we noticed that one strategist (“Slimy”) that made extracellular polymeric substances (EPS) was able to resist attacks from another strategist that employed the T6SS (“Stabby”). This observation motivated us to model this scenario more formally, using dedicated agent-based simulations. The model predicts that EPS production can serve as a collective defence mechanism, which protects both producing cells and neighbouring cells that do not make EPS. We then tested our model with a synthetic community that contains a T6SS-wielding attacker (Acinetobacter baylyi), and two T6SS-sensitive target strains (Escherichia coli) that either secrete EPS, or not. As predicted by our modelling, we find that the production of EPS leads to collective protection against T6SS attacks, where EPS producers protect each other and nearby non-producers. We identify two processes that explain this protection: EPS sharing between cells and a second general mechanism whereby groups of resistant cells shield susceptible cells, which we call “flank protection”. Our work shows how EPS-producing bacteria can work together to defend themselves from the type VI secretion system.

Nature

New paper from the lab showing compensatory mutations in the gac signalling system reducing plasmid fitness costs occur in Pseudomonas populations living in wheat plant rhizosphere communities

https://academic.oup.com/femsec/article/99/4/fiad027/7084981

Compensatory mutations reducing the fitness cost of plasmid carriage occur in plant rhizosphere communities

Compensatory mutations reducing the cost of plasmid carriage occur in the plant rhizosphere.

OUP Academic
RT @Catriona1392
As a regular listener of TWIM it’s super exciting to have our latest paper featured in it!
If anyone fancies a little listen to this week in Microbiology they’ve included our ⁦⁦recent @PLOSBiology⁩ paper. https://podcasts.apple.com/gb/podcast/this-week-in-microbiology/id422332846?i=1000605786121
‎This Week in Microbiology: Quorum Sensing In The Gut on Apple Podcasts

‎Show This Week in Microbiology, Ep Quorum Sensing In The Gut - 24 Mar 2023

Apple Podcasts

Cool molecular microbiology study on plasmid encoded sigma factor of B.subtilis, too much of which will kill the cells👇🏼
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RT @Aisha_Burton
My last grad paper from the Kearns lab is now on BioRxiv.

https://www.biorxiv.org/content/10.1101/2023.03.22.533896v1
https://twitter.com/Aisha_Burton/status/1639281567460630528

RT @evokerr
What prevents multicellular organisms from evolving back to their ancestral state of unicellularity? In a new preprint, @peterlconlin, Heather Goldsby and colleagues show how division of labor can lead to the entrenchment of multicellularity. 🧵(1/14)
https://www.biorxiv.org/content/10.1101/2023.03.15.532780v1
See this great possibility to start your research career with @Anna_Dragos 👇🏼
New labs, ambitious but attentive group leader
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RT @Anna_Dragos
Join our team and apply for open position for researcher/lab manager. Brand new labs, 4.5Y contract, phage-host interactions/PhD possibility in http://dragoslab.org at @UL_BioTech, funded from @ERC_Research
https://www.uni-lj.si/news/job_vacancies/2023032017104152/
https://twitter.com/Anna_Dragos/status/1638857987887333376
Anna Dragoš Lab – Host control by phage

We study different aspects of bacteria control by temperate phages: Host behaviour, Molecular mechanisms and Evolution. Anna Dragoš Assistant Professor, PI.

Dragoš Lab

Cooperative antibiotic resistance facilitates horizontal gene transfer

-in @ISMEJournal by Qinqin Wang et al from @microUCPH

https://www.nature.com/articles/s41396-023-01393-1

Cooperative antibiotic resistance facilitates horizontal gene transfer - The ISME Journal

The rise of β-lactam resistance among pathogenic bacteria, due to the horizontal transfer of plasmid-encoded β-lactamases, is a current global health crisis. Importantly, β-lactam hydrolyzation by β-lactamases, not only protects the producing cells but also sensitive neighboring cells cooperatively. Yet, how such cooperative traits affect plasmid transmission and maintenance is currently poorly understood. Here we experimentally show that KPC-2 β-lactamase expression and extracellular activity were higher when encoded on plasmids compared with the chromosome, resulting in the elevated rescue of sensitive non-producers. This facilitated efficient plasmid transfer to the rescued non-producers and expanded the potential plasmid recipient pool and the probability of plasmid transfer to new genotypes. Social conversion of non-producers by conjugation was efficient yet not absolute. Non-cooperative plasmids, not encoding KPC-2, were moderately more competitive than cooperative plasmids when β-lactam antibiotics were absent. However, in the presence of a β-lactam antibiotic, strains with non-cooperative plasmids were efficiently outcompeted. Moreover, plasmid-free non-producers were more competitive than non-producers imposed with the metabolic burden of a plasmid. Our results suggest that cooperative antibiotic resistance especially promotes the fitness of replicons that transfer horizontally such as conjugative plasmids.

Nature
Congratulations to @jeremyvancleve for this very nice synthesis tracking the history of the Evolutionary Stable Strategy concept and how it grew to connect to models from demography and population genetics and accommodate a lot of complexity in genetics and population structure. https://royalsocietypublishing.org/doi/10.1098/rstb.2021.0496

Diverse and Abundant Viruses Exploit Conjugative #Plasmids | #phage

https://www.biorxiv.org/content/10.1101/2023.03.19.532758v1

Phage for lunch

"Highly purified T4 phages were rapidly internalized by mammalian cells and accumulated within macropinosomes but did not activate the inflammatory DNA response TLR9 or cGAS-STING pathways."
#Preprint #Phage

https://www.biorxiv.org/content/10.1101/2023.03.10.532157v1