nf-coreDec 12

Pipeline release! nf-core/methylseq v4.2.0 - Tapus Maximus!
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth MethylDackel
Please see the changelog: https://github.com/nf-core/methylseq/releases/tag/4.2.0

#bisulfitesequencing #dnamethylation #emseq #epigenome #epigenomics #methylseq #pbat #rrbs #nfcore #openscience #nextflow #bioinformatics

Release Tapus Maximus · nf-core/methylseq

What's Changed bump-version 4.2.0dev by @sateeshperi in #562 Fix error in picard_bedtointervallist.config by @bounlu in #566 bump default and bismark tests after modules update 0.25.1 by @sateeshp...

GitHub
nf-coreAug 10, 2025

Pipeline release! nf-core/methylseq v4.1.0 - Burrows Stardust!

Please see the changelog: https://github.com/nf-core/methylseq/releases/tag/4.1.0

#bisulfitesequencing #dnamethylation #emseq #epigenome #epigenomics #methylseq #pbat #rrbs #nfcore #openscience #nextflow #bioinformatics

Release Burrows Stardust · nf-core/methylseq

nf-core/methylseq 4.1.0 Highlights Optional BWA-MEM2 support via --use_mem2 for BWA-Meth indexing and alignment Nextflow requirement raised to 24.10.5 Broad module/template updates and CI harden...

GitHub
nf-coreJul 4, 2025

Pipeline release! nf-core/methylseq v4.0.0 - Wallace Chrysalis!

Please see the changelog: https://github.com/nf-core/methylseq/releases/tag/4.0.0

#bisulfitesequencing #dnamethylation #emseq #epigenome #epigenomics #methylseq #pbat #rrbs #nfcore #openscience #nextflow #bioinformatics

nf-coreDec 17, 2024

Pipeline release! nf-core/methylseq v3.0.0 🎉

* Modular Bismark & Bwameth Subworkflows
* GPU Support for Bwameth
* BS-Seq Primer & Updated Documentation
* Run Qualimap & Preseq Options
* Reorganized Configuration Files

See the changelog for details: https://github.com/nf-core/methylseq/releases/tag/3.0.0

#bisulfitesequencing #dnamethylation #emseq #epigenome #epigenomics #methylseq #pbat #rrbs #nfcore #openscience #nextflow #bioinformatics

Release Endless Tofu · nf-core/methylseq

What's Changed post-release version bump by @sateeshperi in #450 Fix/fasta gunzip & bismark align cache by @sateeshperi in #457 Feat/fastq align dedup bismark by @sateeshperi in #465 Fasta index b...

GitHub
nf-coreOct 27, 2024

Pipeline release! nf-core/methylseq v2.7.1 - Shattners Bassoon!

Please see the changelog: https://github.com/nf-core/methylseq/releases/tag/2.7.1

#bisulfitesequencing #dnamethylation #emseq #epigenome #epigenomics #methylseq #pbat #rrbs #nfcore #openscience #nextflow #bioinformatics

Release Shattners Bassoon · nf-core/methylseq

What's Changed post-release version bump by @sateeshperi in #446 Patch release 2.7.1 by @sateeshperi in #448 Dev -> Master 2.7.1 by @sateeshperi in #449 Full Changelog: 2.7.0...2.7.1

GitHub
nf-coreOct 25, 2024

Pipeline release! nf-core/methylseq v2.7.0 - Chubby Unicorn!

Please see the changelog: https://github.com/nf-core/methylseq/releases/tag/2.7.0

#bisulfitesequencing #dnamethylation #emseq #epigenome #epigenomics #methylseq #pbat #rrbs #nfcore #openscience #nextflow #bioinformatics

Release Chubby Unicorn · nf-core/methylseq

What's Changed post-release dev bump version and snapshots by @sateeshperi in #371 add missing comma to awstestfull yml by @sateeshperi in #375 Important! Template update for nf-core/tools v2.12 b...

GitHub
nf-coreDec 2, 2022

Happy to see the @nf_core #methylseq pipeline being put through its paces for this article! 🚀

Don't believe the results? Download the raw data and run the workflow yourself 😁🧑‍💻
---
RT @ElemBio
Learn how we assessed AVITI's capability with MethylSeq libraries in this brief blog article and then download the FASTQ sequencing datasets to check them out for yourself! https://bit.ly/3ETs2qu

#dnasequencing #genomics #sciencecantwait
https://twitter.com/ElemBio/status/1598469048479653890

Lower Cost Methylation Detection on AVITI

Learn how we assessed AVITI's capability with MethylSeq libraries in this brief blog article and then download the sequencing datasets to see for yourself!

Element Biosciences