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Co-Founder of http://scifind.io (@sci_find). Molecular Biologist from IndieBio/Girihlet. Building community to troubleshoot scientific problems. Sci Find is an expert network where scientists share information beyond the publication (negative results, methods, troubleshooting, tips, banter, and more!) #OpenScience #OpenAccess
Infohttps://guyrohkin.carrd.co/
Twitterhttps://twitter.com/grohkin
Platformhttps://www.scifind.io/
If you’re not discussing Balenciaga with your PhD advisor you picked the wrong PhD advisor.

Hear ye, hear ye...tomorrow, March 31st, the Arch-florist🌺–
Min Ya (bird app link here https://twitter.com/0_minyaaa)
–will be summoned for an AMA @ 11am PDT/2pm EST in our Discord. Come forth to hear wondrous tales of botanical shenanigans, experimental insights, and photographic artistry. https://discord.gg/s7E6nDxDEn in the salon.

#plantscience #plantbiology #openscience

闵娅 (Min Ya | Minya), PhD (@0_minyaaa) / Twitter

@NSF Postdoc @uconneeb. PhD @HarvardOEB. @MEME_evobio alumna. She/Her. Development & Evolution. Lover of ALL plants. Managing IG: uconnbotanicalconservatory

Twitter

Awesome intro on R in Genomics, talking on sequence alignment and visualization from ~ @ahl27 !!! https://scifind.io/posts/genomics-in-r-part-1-intro-sequence-alignment-and-visualization-5vfasonw71lt4jw ... but also with a continuation on phylogenetic trees featuring–birds! 🐦🦃🦆 https://scifind.io/posts/genomics-in-r-part-2-phylogenetic-reconstruction-ln4dm6r2ybo2azy

#bioinformatics #biology #science #genomics

Genomics in R, Part 1: Intro, Sequence Alignment, and Visualization...

Quick Intro This will be the first of a couple posts I'm planning to make on running some common genomics analyses in R. My advisor develops the DECIPHER package, and I develop the SynExtend pack...

Heyo! 👋 Join me on March 3 @ 11 am PST for the Sci Find Salon on Discord, featuring Sebastian Cocioba (@ATinyGreenCell)This is your chance to learn about DIYBio and ask Sebastian anything about being an independent researcher. He's an amateur biologist, independent researcher, co-founder of Binomica Labs, and a proud plantaemancer. He'll be sharing tales about his riveting experiences straight from his at-home botanical atelier. Repost, share, and register here  : https://eventbrite.com/e/sci-find-salon-with-an-ama-from-sebastian-cocioba-atinygreencell-tickets-538408603627.
Sci Find Salon with an AMA from Sebastian Cocioba (@ATinyGreenCell)

Sci Find Salon - a spot so thrilling, you'll forget you're learning with an AMA from Sebastian Cocioba–our very own modern Mendel.

Eventbrite
Wanted to throw out an intro here~I'm Stefani, one of the founders of https://www.
scifind.net/, an expert network where scientists go to troubleshoot experimental problems. It's an #openaccess tacit knowledge database (a "lab-rary" ) of tips, negative results, optimizations, discussions, methods (stuff that's not in publication really helps get your experiments to work!) Show some love , take a look, make a post and help out :D #openscience #introduction #ScienceMastodon #biology #synbio
Heyo! 👋 Join me on March 3 @ 11 am PST for the Sci Find Salon on Discord, featuring Sebastian Cocioba (@ATinyGreenCell)This is your chance to learn about DIYBio and ask Sebastian anything about being an independent researcher. He's an amateur biologist, independent researcher, co-founder of Binomica Labs, and a proud plantaemancer. He'll be sharing tales about his riveting experiences straight from his at-home botanical atelier. Repost, share, and register here  : https://eventbrite.com/e/sci-find-salon-with-an-ama-from-sebastian-cocioba-atinygreencell-tickets-538408603627.
Sci Find Salon with an AMA from Sebastian Cocioba (@ATinyGreenCell)

Sci Find Salon - a spot so thrilling, you'll forget you're learning with an AMA from Sebastian Cocioba–our very own modern Mendel.

Eventbrite

Our recent paper is out🥳
We identified and characterized proteins interacting with partitioning protein ParB in Pseudomonas aeruginosa, a Gram-negative pathogen causing life-threatening infections in immunocompromised patients.
We mapped the domain of interactions with its cognate ParA partner and showed that ParB–ParA interactions are crucial for the chromosome segregation and for proper SMC action on DNA.

https://journals.asm.org/doi/10.1128/spectrum.04289-22

Almost exactly what I've been looking for - ODGI for pangenome representation and analysis. Still looking for broader scale general review articles though. #bioinformatics #pangenome

https://doi.org/10.1093/bioinformatics/btac308

ODGI: understanding pangenome graphs

AbstractMotivation. Pangenome graphs provide a complete representation of the mutual alignment of collections of genomes. These models offer the opportunity to

OUP Academic

Our NCM 2022 poster and presentation on the usual lab note site- it also looks like the presentation video is on youtube now, for anyone interested "MinION outcome in amateur research: three genomes from 2018 to 2022" #nanopore #amateurbiology #poster

https://naturepoker.wordpress.com/2022/12/22/nanopore-community-meeting-2022/

Nanopore Community Meeting 2022

Commonplace Lab

#introduction !

I’m an immunologist from #Denmark, with a PhD from #NIH and #UniversityofCambridge where I used #CRISPR screens to dissect #Tcell integrin activation.

Now I’m a postdoc at #TechnicalUniversityofDenmark (#DTU ). My interest currently revolves around using/developing novel CRISPR tools for T cell editing as well as using CRISPR to identify novel #immunotherapeutic targets.

Also I love my 2 year old son and my wife, and have a passion for sailing and biotech innovation!