nf-core4d ago

Pipeline release! nf-core/pacvar v1.1.0 - Neon tetra!
Longread PacBio sequencing processing for WGS and PureTarget
Please see the changelog: https://github.com/nf-core/pacvar/releases/tag/1.1.0

#alignment #longread #pacbio #puretarget #variantcalling #wgs #nfcore #openscience #nextflow #bioinformatics

Release Neon tetra · nf-core/pacvar

nf-core/pacvar 1.1.0 - Neon tetra nf-core/pacvar 1.1.0 expands the WGS workflow with major new PacBio long-read analysis capabilities, including copy number variant calling (hificnv), optional sawf...

GitHub
nf-coreMar 6, 2025

Pipeline release! nf-core/pacvar v1.0.1 - v1.0.1 - Sardine [3/6/2025]!

Please see the changelog: https://github.com/nf-core/pacvar/releases/tag/1.0.1

#alignment #longread #pacbio #puretarget #variantcalling #wgs #nfcore #openscience #nextflow #bioinformatics

Release v1.0.1 - Sardine [3/6/2025] · nf-core/pacvar

What's Changed Changed files produced downstream from PBSV to have an output file name containing 'sv' to indicate origin of the files, as with those files downstream from GATK4 and Deepvariant ha...

GitHub
nf-coreFeb 5, 2025

Pipeline release! nf-core/pacvar vv1.0.0 - nf-core/pacvarv1.0.0 - Goldfish [2/05/2024]!

Please see the changelog: https://github.com/nf-core/pacvar/releases/tag/v1.0.0

#alignment #longread #pacbio #puretarget #variantcalling #wgs #nfcore #openscience #nextflow #bioinformatics

Release nf-core/pacvarv1.0.0 - Goldfish [2/05/2025] · nf-core/pacvar

nf-core/pacvar is a bioinformatics pipeline that processes long-read PacBio data. Specifically, the pipeline provides two workflows: one for processing whole-genome sequencing data, and another for...

GitHub