Did you know you can help force your brain in being able to see if a display is #multiplexed either by shaking your head or much more effectively by placing an electric toothbrush against your upper teeth.

Go ahead, try it, I know its tempting.

Yannik Severin at ETH Zurich
https://imsb.ethz.ch/research/snijder_group/people/yannik_severin.html
now speaking on
"Multiplexed high-throughput immune cell imaging reveals molecular health-associated phenotypes"

Seeking to be able to screen #immunecells for responses to drugs
#singlecell resolution, to see morphology, subcellular

developed #multiplexed #PBMC characterization, trained #CNN -- as in #NeuralNetwork
https://www.science.org/doi/10.1126/sciadv.abn5631

#CSSingleCells23

Lacramioara Bintu from Stanford introducing the first speaker of the conference! She is Prisca Liberali from FMI in Basel, joining us virtually.

"Decoding the design principles of tissue organization"

Model system is intestinal #organoids
#selforganization

#CSSingleCells23

One #stemcell can generate an entire, organized, organoid

#multiplexed #SingleCell analysis of organoids, using to understand #regeneration after intestinal damage

A screen with 400K organoids and 3000 compounds!

1/2

RT @leeat_karen@twitter

The lab introduces CellSighter - a new #DeepLearning #algorithm to classify cells in #multiplexed #imaging data
https://www.biorxiv.org/content/10.1101/2022.11.07.515441v1

Looks interesting!

Started work on a multiplexed text file format specification. It was surprisingly simple to implement a proof-of-concept in ruby.
https://gitlab.com/htrob/xtxt

Up next:
- Go implementation
- Writing a RFC in the traditional RFC format.

#ruby #golang #rfc #xtxt #extendedtext #multiplexed