Mastodawn

The Toot of GMOD Jan 27, 2023

To go along with the #JBrowse2 tutorial at #PAG30 a few weeks ago, we also have three talks by JBrowse folks:

@rbuels gave an intro to JBrowse: https://youtu.be/oxdhe_ZLGYs

Colin Diesh gave an overview of JBrowse 2 features: https://youtu.be/jl0BzcBhGqk

Caroline Bridge talked about the JBrowse 2 plugin architecture: https://youtu.be/hJmV97odZ1w

Introduction to JBrowse 2

YouTube

DeNovix Inc.Jan 27, 2023

The Plant and Animal Genome Conference marked the CellDrop's first outing as Sustainable Laboratory Product of the Year!

Want to see the CellDrop for yourself? Check out which conferences we'll be exhibiting at in 2023!

https://www.denovix.com/conferences/?utm_source=mastodon&utm_medium=post&utm_campaign=slpoy

#Science #ScienceMastodon #Genomics #Immunology #Academia #Sustainability #PlantScience #Biology #Fediscience #PAG30

Conferences | DeNovix Team | Products

Click here to see which upcoming Conferences we’ll be attending. Drop by our booth to meet the DeNovix Team and get an introduction to our Products.

DeNovix

TAIR Jan 27, 2023

The Arabidopsis Informatics workshop last week at #PAG30 featured two talks that were relevant to the A. thaliana genome reannotation project. Slide decks have been uploaded to http://tinyurl.com/Athalianav12. #ArabidopsisV12 #community

A. thaliana Col-0 v12 reannotation effort - Arabidopsis Community - Arabidopsis Community

The Toot of GMOD Jan 26, 2023

At #PAG30 earlier this month, we presented a hands on #JBrowse2 tutorial, where the attendees could log into a server, run through setting up a JBrowse 2 instance and added quite a lot of data, including #synteny and #structuralVariation. A video of that tutorial and accompanying updated tutorial to make it easier to do "on your own" are now available at YouTube: https://youtu.be/0MtYsAFEMXI and the tutorial page is at http://gmod.org/wiki/JBrowse2_Tutorial_PAG_2023

JBrowse 2 tutorial PAG 2023

YouTube

Roland Kölliker Jan 18, 2023

Thanks @yutang_mpb_eth, it was great and inspiring being @PAGmeeting with you and Marius.
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RT @yutang_mpb_eth
Finishing off #PAG30 with @RolandKoelliker excellent presentation on disease resistance in outbreeding forage crops! Very well done and many congratulations! @MolecPlantBreed
https://twitter.com/yutang_mpb_eth/status/1615798109875109888

yutang on Twitter

“Finishing off #PAG30 with @RolandKoelliker excellent presentation on disease resistance in outbreeding forage crops! Very well done and many congratulations! @MolecPlantBreed”

Twitter

Tatsuya Nobori Jan 18, 2023

My 3rd (!!!) talk at #PAG30 is tomorrow at 2:40. I’ll present my unpublished work on the single-cell multiomic analysis of plant stress responses.

Dr Julie Blommaert Jan 17, 2023

Shots fired
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RT @biodiversityge1
Overheard at a certain long read vendor’s booth at #PAG30 yesterday: “Illumina: making shitty genomes cheaper”. 🤣
https://twitter.com/biodiversityge1/status/1615447619886809088

Matthew Miller - 🧬 Biodiversity Genomics on Twitter

“Overheard at a certain long read vendor’s booth at #PAG30 yesterday: “Illumina: making shitty genomes cheaper”. 🤣”

Twitter

galaxyproject Jan 17, 2023

Later today come to the Galaxy Workshop to hear about how we are supporting the VGP to study vertebrate evolution. Then get hands on training on how to assemble your own VGP quality genome! #PAG30

Workshop Details: https://plan.core-apps.com/pag_2023/event/3cee484866e6d00c5e492240c4d2d535

via @mike_schatz