Eric Pyrrhus

447 Followers
310 Following
342 Posts
Scientist with an interest in flaviviruses, picornaviruses, and imaging technology. With undergraduate training at Columbia University and the University of Pennsylvania, and graduate training at U.C. Berkeley and UCSF Medical School, he has studied biomedical sciences, bioinformatics, biomedical imaging, biosensors, computer science, artificial intelligence, and business administration. Top image: Extracellular vesicles containing clusters of viruses. Image credit: Bird & Kirkegaard, 2015.
Live, replicating SARS-CoV-2 lingers in hamster brains 80 days post-infection—triggering depression-like behavior, memory loss, and anxiety. This isn’t just collateral damage. The brain is infected. https://www.nature.com/articles/s41467-025-62048-7
Hamsters with long COVID present distinct transcriptomic profiles associated with neurodegenerative processes in brainstem - Nature Communications

SARS-CoV-2 persists in the brainstem long after the initial infection has passed. Infected animals exhibit symptoms of anxiety, depression, and memory impairment as well as changes in the brain that can be related to neurodegenerative processes.

Nature

By Zdenek Vrozina

A major new review from Yale (Moen, Baker, Iwasaki, 2025) offers the most comprehensive picture yet of what SARS-CoV-2 does to the nervous system.

The conclusion is stark:
Long COVID is a chronic neuroimmune disorder affecting brain, spinal cord, and peripheral nerves.

Source: https://threadreaderapp.com/thread/1935759989051998515.html

Study: https://onlinelibrary.wiley.com/doi/10.1111/pcn.13855

X link: https://x.com/ZdenekVrozina/status/1935759989051998515

@auscovid19

Thread by @ZdenekVrozina on Thread Reader App

@ZdenekVrozina: A major new review from Yale (Moen, Baker, Iwasaki, 2025) offers the most comprehensive picture yet of what SARS-CoV-2 does to the nervous system. The conclusion is stark: Long COVID is a chronic neu...…

#Persistence and Active #Replication Status of #Oropouche Virus in Different Body Sites: Longitudinal Analysis of a #Traveler Infected with a Strain Spreading in Latin America, https://etidiohnew.blogspot.com/2025/06/persistence-and-active-replication.html
#Persistence and Active #Replication Status of #Oropouche Virus in Different Body Sites: Longitudinal Analysis of a #Traveler Infected with a Strain Spreading in Latin America

@TCatInReality @marjolica @ChrisMayLA6 Former medicinal chemist here.

Developing drugs is really hard. We have a 96% failure rate.

Here is some math.
Assume $300K FTE rate per scientist.

Find a preclinical candidate: $15M
Tox testing: $5M

Phase 1 clinical trials (safety in healthy subjects - is it safe?): $50M

Phase 2 clinical trails (efficacy in diseased subjects - does it work?): $250M

Phase 3 clinical trials (liability): $300M

Total: $620M if everything works.

But, 96% failure rate.

The radiation of New Zealand’s skinks and geckos is associated with distinct viromes: https://doi.org/10.1186/s12862-024-02269-4

#virome #genomics #biodiversity #biogeography

The radiation of New Zealand’s skinks and geckos is associated with distinct viromes - BMC Ecology and Evolution

Background New Zealand is home to over 120 native endemic species of skinks and geckos that radiated over the last 20–40 million years, likely driven by the exploitation of diverse habitats formed during the Miocene. The recent radiation of animal hosts may facilitate cross-species virus transmission, likely reflecting their close genetic relationships and therefore relatively low barriers for viruses to emerge in new hosts. Conversely, as animal hosts adapt to new niches, even within specific geographic locations, so too could their viruses. Consequently, animals that have niche-specialised following radiations may be expected to harbour genetically distinct viruses. Through a metatranscriptomic analysis of eight of New Zealand’s native skink and gecko species, as well as the only introduced lizard species, the rainbow skink (Lampropholis delicata), we aimed to reveal the diversity of viruses in these hosts and determine whether and how the radiation of skinks and geckos in New Zealand has impacted virus diversity and evolution. Results We identified a total of 15 novel reptilian viruses spanning 11 different viral families, across seven of the nine species sampled. Notably, we detected no viral host-switching among the native animals analysed, even between those sampled from the same geographic location. This is compatible with the idea that host speciation has likely resulted in isolated, niche-constrained viral populations that have prevented cross-species transmission. Using a protein structural similarity-based approach, we further identified a highly divergent bunya-like virus that potentially formed a new family within the Bunyavirales. Conclusions This study has broadened our understanding of reptilian viruses within New Zealand and illustrates how niche adaptation may limit viral-host interactions.

BioMed Central
The Global Atlas of Soil Viruses is finally published! This paper was a massive effort over many years. It's such a good feeling to know that it's out there, at last!
https://www.nature.com/articles/s41564-024-01686-x
A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts - Nature Microbiology

This study presents an extensive global compendium of metagenomically derived sequences that will serve as a foundation for understanding the role of viruses in soil ecosystems.

Nature

Viren sind cool, Folge ca. 3745.

Das Affenpocken-Virus hat drei verschiedene Wege, das eigene Genom aufzublähen und wieder schrumpfen zu lassen. Sinn der Sache: schnelle Anpassung.

https://www.spektrum.de/news/affenpocken-neues-gen-akkordeon-soll-globale-epidemie-erklaeren/2214772

Neues »Gen-Akkordeon« soll globale Epidemie erklären

Bis heute ist rätselhaft, wieso sich das zuvor seltene Affenpocken-Virus plötzlich weltweit verbreitete. Erbgutbereiche mit Akkordeon-Funktion könnten das Rätsel lösen.

Spektrum.de

Happy to share the latest manuscript from our lab, in which we propose that eukaryotes evolved from a genomic chimera of Asgard archaea and giant viruses.

https://www.biorxiv.org/content/10.1101/2024.04.22.590592v1

This is a controversial topic, but we believe we have strong evidence to suggest a critical viral role in eukaryogenesis.

#viruses #protists #eukaryotes #evolution #TreeOfLIfe #archaea

**Metagenomic analysis of individual mosquito viromes reveals the geographical patterns and drivers of viral diversity**
https://www.nature.com/articles/s41559-024-02365-0#citeas
Metagenomic analysis of individual mosquito viromes reveals the geographical patterns and drivers of viral diversity - Nature Ecology & Evolution

A meta-transcriptomic analysis of the viromes of 2,438 mosquitoes of 81 species from across China identifies geographic hotspots of mosquito virus diversity, links between mosquito virome composition and host phylogeny, and a suggestion of long-distance mosquito dispersal.

Nature

"This raises the question of why so many pathways that react to the challenge of infection or tissue injury use mitochondria as a central signalling hub to integrate and transduce the cell’s response. One probable factor is that the endosymbiotic origin of mitochondria marks them apart from the rest of the cell in a way that can be co-opted to produce key messages pertaining to cell fate"

https://www.nature.com/articles/s41586-023-06866-z?utm_medium=Social&utm_campaign=nature&utm_source=Twitter#Echobox=1707326560

A break in mitochondrial endosymbiosis as a basis for inflammatory diseases - Nature

We suggest that as mitochondrial signals probably contribute to the homeostatic role of inflammation, dysregulation of these processes may lead to autoimmune and inflammatory diseases, with increasing evidence pointing to the recent failure of endosymbiosis being crucial.

Nature