Mastodawn

These topics include:
-- #Genomic insights into evolutionary innovations
-- Genomic and functional #evolution for diversification
-- #Phylogenomic and #phylotranscriptomic discoveries in #adaptation
-- Genomic resources and software for evolutionary investigations

J of Systematics and Evolution Apr 15

Xue et al. won a 2024 #JSE Outstanding Paper Award for this🏆🔥study that used mitochondrial #genes from 18 angiosperms to fill sampling gaps for #phylogenomic inferences of early flowering #plant diversification!
https://jse.ac.cn/EN/10.1111/jse.12708
@WileyEcolEvol
#evolution #systematics

J of Systematics and Evolution Mar 31

🎶All they do is win, win, win...🎶
Gao et al. won their 2024 #JSE outstanding paper award for this fascinating study that used integrated #phylogenomic analyses to characterize ancestral #gene duplications in #mosses.
Read it for free!🔓👇
https://jse.ac.cn/EN/10.1111/jse.12683
@wileyecolevol #botany #evolution

CellBioNews Jan 24

New tool enables #phylogenomic analyses of entire #genomes

#CASTER

https://phys.org/news/2025-01-tool-enables-phylogenomic-analyses-entire.html

New tool enables phylogenomic analyses of entire genomes

Researchers led by electrical engineers at the University of California San Diego have developed a better way to perform the comparative analysis of entire genomes. This approach can be used to study relationships between different species across geological time scales.

Phys.org

J of Systematics and Evolution Oct 20, 2024

All in the family!
This fascinating new study by Otero et al. uses Hyb-Seq to provide #phylogenomic support for the #allopolyploid origin of the northwest Iberian endemic #orchid Dactylorhiza cantabrica.🔓👇
https://doi.org/10.1111/jse.13131
@WileyEcolEvol
#JSE #evolution #PlantSci #OA #Botany #openaccess

J of Systematics and Evolution Sep 9, 2024

🎶Daisy, Daisy...give me your answer, do!🌼🎶

Criado-Ruiz et al. get *all* those answers for us in their new #phylogenomic approach to disentangling the #evolution of a large and diverse #daisy tribe. https://doi.org/10.1111/jse.13118
@WileyEcolEvol
#evolution #PlantSci #JSE #biogeography

PLOS Biology May 22, 2024

Reconstructing the #TreeOfLife is a central goal in biology. @jlsteenwyk & Nicole King discuss the use of #synteny for reconstructing the ToL and propose a roadmap for conducting rigorous & accurate synteny-based #phylogenomic analysis #PLOSBiology https://plos.io/3Vavczo

The promise and pitfalls of synteny in phylogenomics

Reconstructing the tree of life is a central goal in biology. This Essay discusses the use of synteny, an emerging phylogenomic marker, for reconstructing the tree of life and propose a roadmap for conducting rigorous and accurate synteny-based phylogenomic analysis.

J of Systematics and Evolution May 9, 2024

Aguirre-Santoro et al. use a #phylogenomic framework to explore the #phenotypic #evolution and biogeography of Puya in the #Andean slopes and sky island ecosystems in this gorgeous new #JSE paper!
https://doi.org/10.1111/jse.13062
@wileyecolevol #PlantSci #botany

JIPB May 4, 2024

Using #phylogenomic analyses + spatial-temporal dynamics and global #environmental data, Liu et al. highlight the importance of both #evolutionary and #ecological data for studying mechanisms of global #biodiversity. https://doi.org/10.1111/jipb.13638
@wileyplantsci
#PlantSci #Cycas #cycads #botany

ERGA Nov 27, 2023

Spread the news 📢 We have new speakers and topics for this week's #BioGenome #Analysis and #Application seminar! Our focus will remain on state-of-the-art #phylogenomic methods.

Talks:
1. Pythia – predicting the difficulty of phylogenetic analyses (Julia Haag)
2. Adaptive RAxML-NG: Accelerating Phylogenetic Inference under Maximum Likelihood using Dataset Difficulty (Anastasis Togkousidis)

📅 Wednesday 29.11 - 12:00 CET
▶ https://www.youtube.com/watch?v=xyS6SR8uiGQ

Pythia and Adaptive RAxML-NG (Methods in Phylogenomics) - Julia Haag & Anastasis Togkousidis

YouTube