Took a while, but finally out:
Pruning the Tree: Comparing #OTUs and #ASVs in High-Throughput Sequencing of 5S-IGS Nuclear Ribosomal DNA in #Phylogenetic Studies
How to reduced 100ks of reads down to the 100 really needed, a comparison between #Mothur and #dada2 pipelines using our nigh-#reticulate #beech dataset as test subject
trying out #strudel integration as a sequencing unit in the #phylogenetic #tree viewer at phylogeny.synth.is :
- at https://phylogeny.synth.is - based on Strudel.cc
🆕 “High #phylogenetic distance between non-native #species and the recipient community increases #invasion success.”
- the formal definition #invasion #scientists propose in structured format for #Darwin’s #naturalisation hypothesis.
🔗 Check out the Hypothesis Description openly published with us: https://doi.org/10.3897/rio.11.e140548
In this contribution of the Hypothesis Description series, we provide an overview of one of the longest-standing hypotheses in invasion science: Darwin's naturalisation hypothesis. We present a brief summary of past definitions and propose the revised definition “high phylogenetic distance between non-native species and the recipient community increases invasion success”. This formulation follows the basic form ‘subject – relationship – object’, enabling clarity for future research and computational applications in invasion biology. We also provide formalised definitions for previous formulations of the hypothesis and identify both related and opposite hypotheses to Darwin’s naturalisation hypothesis.
grimmiges
aflands
J of Systematics and Evolution
Giuseppe Michieli
RIO Journal