SBGrid

@sbgrid@mstdn.science
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87 Following
422 Posts

New Title Alert: Tomotools- a tool that provides scripts for making cryo-electron tomography a bit easier.

Learn more here: https://github.com/tomotools/tomotools

#SBGrid #Software #StructuralBiology

GitHub - tomotools/tomotools: Scripts to make cryo-electron tomography a bit easier

Scripts to make cryo-electron tomography a bit easier - tomotools/tomotools

GitHub

New Title Alert: Protenix- a trainable PyTorch reproduction of AlphaFold 3.

Learn more here: https://github.com/bytedance/Protenix

#SBGrid #Software #StructuralBiology

GitHub - bytedance/Protenix: A trainable PyTorch reproduction of AlphaFold 3.

A trainable PyTorch reproduction of AlphaFold 3. Contribute to bytedance/Protenix development by creating an account on GitHub.

GitHub

In case you missed our April webinar, it is now available! @alisterburt@struct.bio, Ph.D., Computational Scientist, Genentech presented Warp.

Topic: A Hitchhiker’s Guide to Structural Cryo-ET in Warp 2.0 & Friends.
Host: Shaun Rawson
Recorded on April 8, 2025

https://buff.ly/IaMHTez

#SBGridWebinars

warp

YouTube

New Title Alert: smap- a tool for detecting unlabeled macromolecules in 2D Cryo-EM images of cells that uses high-resolution template matching.

Learn more here: https://github.com/jpr-smap/smap_v2.1

#SBGrid #Software #StructuralBiology

GitHub - jpr-smap/smap_v2.1

Contribute to jpr-smap/smap_v2.1 development by creating an account on GitHub.

GitHub

New Title Alert: warp-tm-vis- a tool to visualize template matching results from Warp.

Learn more here: https://github.com/warpem/warp-tm-vis

#SBGrid #Software #StructuralBiology

Externalization of phospholipids by dual functioning proteins in hearing: a publication highlight from Meharry Medical College Ph.D. candidate KeAndreya Morrison's featuring the laboratory of SBGrid member Jeffrey Holt and colleagues.

Read more here: https://buff.ly/zyEGpej

#SBGrid #Tmc1Proteins

Externalization of phospholipids by dual functioning proteins in hearing

This publication highlight is part of the SBGrid Communities Project focused on science education and demonstrating how structural biology and preclinical science connect to medicine, a collaboration…

SBGrid Community News

Caltech doctoral student Vida Robertson highlighted a paper in Acta Cryst F, from SBGrid member Craig Smith at Washington University School of Medicine in St. Louis & colleagues.

Read more here: https://buff.ly/oJM3ZtD

#SBGrid #HPylori #Crystallography

Unlocking key steps of H. pylori growth to design better treatments for ulcers

This publication highlight is part of the SBGrid Communities Project, focused on science education and demonstrating how structural biology and preclinical science connect to medicine, a…

SBGrid Community News

Our March member tale puts the spotlight on Ryan Hibbs from @ucsandiego , who has learned to make the most of surprises, both personally and professionally. Hibbs's work on ion channels is divided between synapse and sinew, examining how neurotransmitter receptors function in muscle and in the mind.

Read more here: https://sbgrid.org/members/tale/mind_and_muscle?utm_source=AdaptiveMailer&utm_medium=email&utm_campaign=SBGrid%20Newsletters&org=1935&lvl=100&ite=547&lea=24537&ctr=0&par=1&trk=a0NNv000000YUq5MAG

#StayConnected #ScienceMatters

SBGrid Consortium - Member Tale - Ryan Hibbs - University of California, San Diego

The SBGrid Consortium is an innovative global research computing group operated out of Harvard Medical School. SBGrid provides the global structural biology community with support for research computing.

New Title Alert: DomainSeeker- a tool designed for de novo identification of protein domains in cryo-ET maps of protein complexes.

Learn more here: https://github.com/zyzhangGroup/DomainSeeker

#SBGrid #Software

GitHub - zyzhangGroup/DomainSeeker: DomainSeeker is a tool designed for de novo identification of protein domains in cryo-ET maps of protein complexes.

DomainSeeker is a tool designed for de novo identification of protein domains in cryo-ET maps of protein complexes. - GitHub - zyzhangGroup/DomainSeeker: DomainSeeker is a tool designed for de nov...

GitHub

New Title Alert: polychrom- a tool designed to build mechanistic models - i.e. models that simulates a biological process.

Learn more here: https://github.com/open2c/polychrom

#SBGrid #Software #StructuralBiology

GitHub - open2c/polychrom: Chromosome polymer simulations and in silico capture experiments

Chromosome polymer simulations and in silico capture experiments - open2c/polychrom

GitHub