Wild Flowers Festival at Frozen Head State Park #stateparks
#TN with Tennessee Native Plant Society (Larry Pounds)
#TNPS
#TN with Tennessee Native Plant Society (Larry Pounds)
#TNPS
Gautam Shirsekar
- 18 Followers
- 50 Following
- 14 Posts
I am a plant pathologist. I study host-pathogen coevolution in wild plant pathosystems using population genomics. (Assistant Professor, Entomology and Plant Pathology, at Univ. of Tennessee, Knoxville) www.coevolutionlab.org
SFGravelOn Friday,
@diazale successfully defended a wonderful thesis on modelling high-dimensional genetic data. A must-read if you are working with UMAP or genetic clustering, or if you just like well-written and thoughtful scientific writing. Congratulations!
@diazale successfully defended a wonderful thesis on modelling high-dimensional genetic data. A must-read if you are working with UMAP or genetic clustering, or if you just like well-written and thoughtful scientific writing. Congratulations!
@alxsim @coevolution
You can find it here: https://github.com/diazale/phd_thesis.
My understanding is that the S t-SNE refers to the fact that we are considering distances between neighbouring points as drawn from a distribution, and we are trying to align low- and high-dimensional distributions. In principle one could use this to estimate uncertainty in representation, but the truth is that the "best" representation is so hard to find, due to many local minima, that other sources of uncertainty dominate.
You can find it here: https://github.com/diazale/phd_thesis.
My understanding is that the S t-SNE refers to the fact that we are considering distances between neighbouring points as drawn from a distribution, and we are trying to align low- and high-dimensional distributions. In principle one could use this to estimate uncertainty in representation, but the truth is that the "best" representation is so hard to find, due to many local minima, that other sources of uncertainty dominate.
Arlin StoltzfusI'm enjoying this new preprint by Bénitière, et al on alternative splicing (AS) and the drift barrier
Panel A: abundant AS forms tend to be frame-preserving (i.e., sensible), whereas the rare ones look like a lot of junk
Panel C and D: the two kinds have opposing correlations with proxies for 1/N_e (longevity and body size)
Kevin Krebs
Russell Garwood⚠️ Science / evolution chums ⚠️
If you want a spatially explicit eco-evoutionary simulation to play with, we have just released a new version of REvoSim:
https://joss.theoj.org/papers/10.21105/joss.05284
It runs (with GUI) on all operating systems. Binaries here:
