James Fellows YatesSep 30, 2023

📢 New release of AncientMetagenomeDir (v23.09: Historic Centre of Cienfuegos) by the @spaam_community !

https://github.com/SPAAM-community/AncientMetagenomeDir/releases/tag/v23.09.0

💀 #AncientMetagenomeDir is a community curated resource of standardised lists of #metadata of >2000 shotgun-sequenced and publicly available #AncientMetagenome or ancient microbial genome-level enriched samples and >5000 libraries.

Release stats in the thread below 👇

#AncientDNA #palaeogenomics #aDNA #SPAAM #metagenomics

Release v23.09: Historic Centre of Cienfuegos · SPAAM-community/AncientMetagenomeDir

Release v23.09.0 includes 7 new publications, representing 2 new ancient host-associated metagenome samples, 35 new ancient microbial genomes, and 0 new ancient environmental samples. This brings t...

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Show threadJames Fellows Yates

📈 Release v23.09 (Historic Centre of Cienfuegos) includes:

📚 176 (+7) publications
🧬 1401 (+2) ancient host-associated metagenome samples
🦠 621 (+35) ancient microbial genomes
🌅 582 (+0) ancient environmental samples

🧬 2400 (+2) ancient host-associated metagenome sequencing runs
🦠 2866 (+564) ancient microbial sequencing runs
🌅 674 (+0) ancient environmental sequencing runs

Many thanks to Anan, Diana, Cameron, and Alex for their efforts! [🧵 2/3]

Sep 30, 2023 at 10:01amWeb
Show threadJames Fellows YatesSep 30, 2023

🛠️ And as always if you want to explore the dataset and download all the data with pre-configured pipeline input sheets try our new both GUI and CLI based tool AMDirT

https://www.spaam-community.org/AMDirT/

https://github.com/SPAAM-community/AMDirT

🙏 We are currently looking for reviewers for the #preprint so please contact me if you're into #OpenScience #OpenData #bioinformatics particularly if you have interest in #metagenomics and #ancientDNA [🧵 3/3]

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