The startup message of the #MSnbase package for #MassSpectrometry and #Proteomics has been update in version 2.29.2, and now officially asks users to look into the #RforMassSpectrometry initiative packages:
> library(MSnbase)
This is MSnbase version 2.29.2
Visit https://lgatto.github.io/MSnbase/ to get started.
Consider switching to the 'R for Mass Spectrometry'
packages - see https://RforMassSpectrometry.org for details.