Thomas H Huxley was born OTD in 1825. The idea of “warfare” between science and religion is suspect, but it works for H. Protestantism lacks “a trace of any desire to set reason free. The most that can be discovered is a proposal to change masters” from the Pope to the Bible. 🧪🌱🐋 #HistSTM #EvoBio

The May issue of MBE is here, featuring the work of Topaloudis et al., who evaluated genotype imputation accuracy in a large barn owl low-coverage WGS dataset.

🔗 https://academic.oup.com/mbe/issue/43/5

📷 Alex Labhardt

#evobio #molbio

Berruga-Fernández et al. show that bacterial hybrid chromosome formation driven by conjugative mobile genetic elements may be an important and widespread mechanism in the emergence and evolution of high-risk bacterial pathogens.

🔗 https://doi.org/10.1093/molbev/msag085

#evobio #molbio #bacteria

Ceriotti et al. investigate the rewiring of organellar translation in the holoparasitic Balanophoraceae, revealing extreme changes in the anciently conserved machinery of plant organellar translation.

🔗 https://doi.org/10.1093/molbev/msag077

📷 Tuber and two inflorescences of the holoparasitic plant Lophophytum pyramidale collected from Parque Nacional Calilegua, Argentina

#evobio #molbio

Pinto et al. present SCINKD as a framework to identify unannotated sex chromosomes and curate diploid genome assemblies from a single individual.

🔗 https://doi.org/10.1093/molbev/msag067

#evobio #molbio #compbio

Sex chromosome identification and genome curation from a single individual with SCINKD

Abstract. In most animal species, the sex-determining pathway is typically initiated by the presence/absence of a primary genetic cue at a critical point d

OUP Academic

Cui et al. investigate the evolutionary trajectory leading to dim-light vision in vertebrates, concluding that it evolved via three main stages of molecular adaptation, at the origins of ancestral rhodopsin pigments.

🔗 https://doi.org/10.1093/molbev/msag096

#evobio #molbio #opsin

Cochetel & Cantu publish a new MBE Review on plant pangenomes, outlining major paradigms from gene-based catalogs to haplotype-resolved graphs, core and variable compartments, and how graph-based frameworks enable analyses that are difficult with single linear references.

🔗 https://doi.org/10.1093/molbev/msag087

#evobio #molbio #pangenome

Steven Frank explains how such things as natural selection or AI can be interpreted as reflections of the linear regression. Though he admits:"In both cases [ML and Natural Selection] causal attribution is hindered by nonlinear interactions"1/2
https://academic.oup.com/evlett/advance-article/doi/10.1093/evlett/qrag018/8660666
1/2
🧪 #EvoBio #Paleobio
The famous DNA diagram from the Watson/Crick paper was more than just a post-hoc visual representation. Diagramming DNA played a key role in their solution of its structure. On the role of diagramming in DNA research, and in science more generally, see below. 🧪🌱🐋 #HistSTM #EvoBio

RE: https://bsky.app/profile/did:plc:6eqjufcnopmdmucccde5aeob/post/3mkdasxmjis2m


Tools of Reason: The Practice ...
OTD in 1953, J Watson and F Crick published a paper describing the double helical structure of DNA in the journal Nature. M Wilkins and co-authors, and R Franklin and R Gosling, published separate papers in the same issue with X-ray crystallography analysis. 🧪🌱🐋 #HistSTM #EvoBio