Day 12: “On the twelfth day of OpenCRAVAT, my discovery gave to me…”
🎉 A Genomic Variant Community

Our community is at the heart of everything we do. From researchers to clinicians, your feedback shapes OpenCRAVAT's future. Join us in celebrating our shared journey in variant annotation.
💬 Connect: https://github.com/KarchinLab/open-cravat/discussions
Thank you for being part of our adventure!

#12DaysOfOpenCRAVAT #Community #Genomics 🧬 🖥️

KarchinLab open-cravat · Discussions

Explore the GitHub Discussions forum for KarchinLab open-cravat. Discuss code, ask questions & collaborate with the developer community.

GitHub

⚙️ Day 11: Widgets That Work for You!

Customization is 🔑! OpenCRAVAT’s widgets allow you to visualize variant data in a way that makes sense for your workflow.

🌐 Explore widgets: https://docs.opencravat.org/en/latest/1.-Installation-Instructions.html#installing-viewer-widgets
What’s your favorite widget? Let us know!

#12DaysOfOpenCRAVAT #GenomicTools #DataVisualization🖥️ 🧬

Installation Instructions — open-cravat documentation

🌐 On the 10th day of #OpenCRAVAT, my workflow gave to me…
✨ Powerful API Capabilities!
Integrate OpenCRAVAT into pipelines: submit jobs, check statuses, and fetch custom reports programmatically.
Explore the API docs: https://docs.opencravat.org/en/latest/API.html
#12DaysofOpenCRAVAT #Genomics
API — open-cravat documentation

☁️ Day 9 of #OpenCRAVAT: Run on the Cloud!
No hardware limits, no delays—just efficient genomic analysis anywhere. Learn how to set up OpenCRAVAT on the cloud today.
🔗Cloud Usage: https://docs.opencravat.org/en/latest/Cloud.html
#12DaysofOpenCRAVAT #CloudComputing 🖥️ 🧬 #Genomics #Variants
Cloud Usage — open-cravat documentation

🔎 Day 8 of #OpenCRAVAT: Eight Data Filtering Options!
Refine your results with precision: filter by gene, variant type, pathogenicity score, or population frequency.
Which filter is most useful for your research? Comment below!
🔗Filtering Tutorial: https://docs.opencravat.org/en/latest/Filter-Tutorial.html
#12DaysofOpenCRAVAT #VariantAnalysis 🧬 🖥️
Filter tutorial — open-cravat documentation

🎁 Day 7: Customize Your Analysis with OpenCRAVAT!

1️⃣ Choose annotations from hundreds of modules.
2️⃣ Filter to focus on specific genes or variants.
3️⃣ Automate with custom Python scripts.
4️⃣ Select input formats: VCF, HGVS, or dbSNP.
5️⃣ Adjust visualization settings.
6️⃣ Export reports as TXT, Excel, or SQLite.
7️⃣ Run analyses locally or in the cloud.

Explore these features today! What’s your favorite way to customize? Let us know! #12DaysofOpenCRAVAT #Genomics #VariantAnalysis

Getting Started with the Website and GUI — open-cravat documentation

Getting Started with the Website and GUI — open-cravat documentation

Getting Started with the Website and GUI — open-cravat documentation

Update instructions — open-cravat documentation