Michael MacCoss

237 Followers
211 Following
130 Posts
Academic scientist at the University of Washington with an interest in #massspectrometry and #proteomics.
Websitehttps://maccosslab.org
LinkedInhttps://www.linkedin.com/in/maccoss/
OrchID0000-0003-1853-0256

While I personally stopped tweeting in May, it was clear that now was the time for Flipboard to stop tweeting as well.

This is a sad outcome given that Twitter was the platform we got started on in 2010 and I was a board member there with Jack, Ev and Dick. But that Twitter is gone now. And the future is the open social web.

https://techcrunch.com/2023/11/21/flipboard-stops-tweeting-launches-new-podcast-about-decentralized-social-apps/

Flipboard stops tweeting, launches new podcast about decentralized social apps | TechCrunch

Social magazine app Flipboard had already committed to joining the "fediverse" -- the decentralized social web, which includes apps like Mastodon. Now,

TechCrunch
@RonBeavis Yasset had this idea that people can suggest such annotations via his repository and they would be taken back to PX. I don't know whether it still works but that would solve the problem?
https://github.com/bigbio/proteomics-sample-metadata
GitHub - bigbio/proteomics-sample-metadata: The Proteomics Experimental Design file format: Standard for experimental design annotation

The Proteomics Experimental Design file format: Standard for experimental design annotation - GitHub - bigbio/proteomics-sample-metadata: The Proteomics Experimental Design file format: Standard fo...

GitHub

"The German government has launched a new Open Source software project called openDesk, which aims to reduce the country’s dependency on proprietary software vendors and support transparency and interoperability.

openDesk is a collection of #OpenSource software modules that are important for day-to-day work in the public sector, such as text creation, file collaboration, project management, email, calendar and messaging."

#FOSS #government #overheid #DigitalSovereignty

https://opensource.net/governments-adopt-open-source-sovereignty/

Governments turn to Open Source for sovereignty - OpenSource.net

The German government is developing a digital workplace platform called openDesk, to reduce dependency on proprietary software vendors and support transparency and interoperability.

OpenSource.net
@ZachWeinersmith a nice visual illustration of that:

@proteomicsnews blog post | Hate your nanospray source? 3D print a better one! https://proteomicsnews.blogspot.com/2023/09/hate-your-nanospray-source-3d-print.html

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#proteomics #prot-other

Hate your nanospray source? 3D print a better one!

  WOOOOHOOOO! Okay, JASMS (Journal of the Ablebodied Sapiens of Mass Spectrometry) is on FIRE this month. I have to really read the next one...

Nature Biotechnology on X

An advanced AI model based on AlphaFold predicts the pathogenicity of missense variants and assesses for all potential human single amino acid substitutions in the human proteome. #NBThighlight https://t.co/Hk1xzqL1l8

X (formerly Twitter)

AITA, academic publishing edition.

Journal sends a review back to me because as reviewer I did not run the code and replicate the results.

My reply: "As an unpaid anonymous peer reviewer who handles probably 30 manuscripts a year, I am absolutely not in the position of running and evaluating code any more than I am in the position of running gels to evaluate lab results. If this is important to you, I suspect you can find a consultant who will do it at a reasonable rate."

Am I the asshole?

Yes, you are the asshole
2%
No, you are not the asshole
84.2%
Show me the results
13.7%
Poll ended at .

Almost ready for #HUPO2023 after a long trip to Busan.

I'm looking forward to chair the #ComputationalProteomics/#Bioinformatics pre-conference training session tomorrow morning (Sunday Sept 17, 9:00–12:00), together with an all-star team. Meet us there!

https://2023.hupo.org/scientific-program-program-at-a-glance/

Scientific Program & Program at a Glance - HUPO 2023 World Congress

HUPO 2023 World Congress is taking place in beautiful Busan, South Korea. Sign up for the largest event in Proteomics!

HUPO 2023 World Congress
Flew from Seattle to Frankfurt last night and was lucky enough to have a port-side window seat!
@RonBeavis I do have to say growing up in the Suburbs of Detroit that this correlation was real ;)