bioAF

@bioaf
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2 Following
6 Posts

bioAF is a free, open-source tool that gives small biotech teams production-grade pipelines, notebooks, and experiment tracking on day one and all in their own cloud environment. No infrastructure engineer required.

https://bioaf.co

@claudeai , @chatgpt , and #Gemini now integrate with bioAF for AI Review of your pipeline runs and experiments, letting you find patterns faster than ever before.

https://tinyurl.com/mvyb6cnu
#biology #biotech #bioinformatics

AI Review: an LLM advisory layer for pipeline outputs

Hosted LLM reviews of completed pipeline runs and experiment-wide comparisons, with a prompt builder for what to ask, support for prompt customization, and audit logging.

bioAF

Your #LIMS and bioAF can now work as one. With the new integration API, projects, experiments, and samples flow automatically. Your team stops shuffling data and gets back to the science.

https://tinyurl.com/mrscefrv

#biology #biotech #bioinformatics

Connecting your LIMS with the bioAF Integration API

A public, key-authenticated API plus signed webhooks so your LIMS and other lab systems can read and write projects, experiments, and samples without manual re-keying.

bioAF

Did you know bioAF allows you to search and run any @nf_core pipeline with no manual infrastructure setup? bioAF's installer builds everything for you. Just search for the pipeline you want, click to install, and you're off! Check out bioaf.co for details and walkthroughs.

#biology #biotech #bioinformatics

BioTech startups need to focus on science, not dealing with software. bioAF makes this easy with push-button updates to always keep your team equipped with the latest tools.

https://bioaf.co/blog/updating-bioaf/

#biology #biotech #bioinformatics

Updating bioAF

Check your version, see what’s new, and install an update without leaving the web UI.

bioAF

I did a full walkthrough from creating your first experiment in bioAF to running an nf-core pipeline and getting QC results. Check out the full process here!

https://bioaf.co/blog/getting-started-with-projects-experiments-and-pipelines/

#biology #biotech #computationalbiology

Getting started with projects, experiments, and pipelines

From an empty platform to a finished scRNA-seq run: projects, experiments, samples, files, and an nf-core pipeline end to end.

bioAF

Use bioAF to deploy a full computational infrastructure stack in Google Cloud for biotech startups in 12 minutes.

File storage, experimental metadata, notebooks, work nodes, and Nextflow, nf-core, and custom pipelines.

https://bioaf.co/blog/installing-bioaf-in-12-minutes/

#biology #biotech #bioinformatics

Installing bioAF in 12 minutes

A walkthrough of the quickstart installer: one command, a few prompts, and zero hand-written configuration.

bioAF