Alice DennisLots of fun making a chain reaction at #biohackeu25
| ORCID | https://orcid.org/0000-0003-0914-2470 |
| GitHub | https://github.com/abretaud |
Anthony Bretaudeau
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- 53 Following
- 97 Posts
galaxyprojectOn Day 2 of European Galaxy Days, Yvan Le Bras presented Galaxy Ecology: 2025 Update.
Read more: https://ecology.usegalaxy.eu/
@galaxyfreiburg
#EGD2025 #ecology #galaxyproject #galaxy_ecology #eosc #fair #open_science
GenOuest🚀 ON RECRUTE : Ingénieur·e Développeur·se – DevOps (H/F) à Rennes ! 🚀
Compétences recherchées :
🔹 Python/Linux
🔹 Web (JS, API REST)
Projet ATLASea, laboratoire IRISA, Rennes
💡 Intéressé·e ? Postulez & partagez !
https://emploi.cnrs.fr/Offres/CDD/UMR6074-ANNBUZ-030/Default.aspx
Bjoern GrueningThe #eosc EuroScienceGateway project has assessed the sustainability of the #usegalaxy project and published a report available at https://gxy.io/sustainability
Enjoy reading this long document and point everyone that have been in doubt :)
Galaxy Sustainability Report
Title:Galaxy Sustainability Report 2025 Description:This report provides an in-depth analysis of the sustainability of the Galaxy platform, a globally recognized open-source system for data analysis, workflow management, and scientific collaboration. Developed under the EuroScienceGateway project and supported by the European Union’s Horizon Europe program (Grant Agreement No. 101057388), the report evaluates Galaxy through the lenses of desirability, feasibility, and viability using a robust analytical framework derived from design thinking and open-source community health metrics (CHAOSS). The report presents empirical data on Galaxy's rapid growth in user adoption, job execution volume, infrastructure robustness, contributor engagement, community governance, and scientific impact. It highlights Galaxy’s ability to democratize access to advanced computational tools, support reproducible science, and maintain long-term sustainability through a distributed community and institutional support. This document is a valuable resource for funders, policymakers, and stakeholders in the open science and digital research infrastructure community, illustrating why Galaxy represents a low-risk, high-reward investment in the future of data-driven research. Authors:Smitesh Jain (EGI Foundation)on behalf of the EuroScienceGateway Consortium Funding Acknowledgement:This project was funded by the European Union’s Horizon Europe programme under Grant Agreement No. 101057388.
Galaxy Training NetworkAn Ode to Helena - from the 🥓Bacon Brigade
@gtn:hexylena, as a key member of the phenomenally creative and passionate Galaxy Training Network team alongside @gtn:shiltemann and @gtn:bebatut, pioneered the concept of Training Infrastructure. In a world dominated by clunky virtual learning environments and expensive software, she built an open-source system that could seamlessly support individual users, https://training.galaxyproject.org/training-material/news/2025/03/07/ode_to_helena.html
An Ode to Helena - from the 🥓Bacon Brigade
@gtn:hexylena, as a key member of the phenomenally creative and passionate Galaxy Training Network team alongside @gtn:shiltemann and @gtn:bebatut, pioneered the concept of Training Infrastructure. In a world dominated by clunky virtual learning environments and expensive software, she built an open-source system that could seamlessly support individual users, trainers, and contributors across diverse disciplines and expertise levels.
Happy new year!
This week, we're migrating to our new storage system: https://help.genouest.org/new_storage/
Most of our services are offline currently while we're transferring data. They will be resumed as soon as possible
This week, we're migrating to our new storage system: https://help.genouest.org/new_storage/
Most of our services are offline currently while we're transferring data. They will be resumed as soon as possible
🎉 Galaxy has surpassed 500k registered users across all instances! 🌍
Thank you to our incredible community for making this milestone possible. Here’s to more accessible, reproducible science!
GenOuest recrute un·e ingénieur·e développeur MLOps en bioinformatique. Plus d'information et candidature sur https://emploi.cnrs.fr/Offres/CDD/UMR6074-ANTBRE-002/Default.aspx
Thanks to Romane Libouban, we now have a Helixer tutorial for Galaxy 🎉
Live on the @gtn: https://training.galaxyproject.org/training-material/topics/genome-annotation/tutorials/helixer/tutorial.html
Live on the @gtn: https://training.galaxyproject.org/training-material/topics/genome-annotation/tutorials/helixer/tutorial.html
Genome Annotation / Genome annotation with Helixer / Hands-on: Genome annotation with Helixer
Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.
hrhotzThe @galaxyproject Training Academy is open for registration! https://gxy.io/GTA1
Galaxy Training Academy 2024
The Galaxy Academy is a self-paced online training event for beginners as well as learners who would like to improve their Galaxy data analysis skills. Over the course of one week, we will have a different topic and focus every day. Start the Course!