StatsForBios

@Statsforbios
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Statistics for biologists (and medics). Run by Tim Lucas. U. of Leicester. He. timcdlucas.github.io/

MetaBayesDTA: codeless Bayesian meta-analysis of test accuracy, with or without a gold standard"
New paper by Enzo Cerullo.

Paper: https://bmcmedresmethodol.biomedcentral.com/articles/10.1186/s12874-023-01910-y

App: https://crsu.shinyapps.io/MetaBayesDTA/

MetaBayesDTA: codeless Bayesian meta-analysis of test accuracy, with or without a gold standard - BMC Medical Research Methodology

Background The statistical models developed for meta-analysis of diagnostic test accuracy studies require specialised knowledge to implement. This is especially true since recent guidelines, such as those in Version 2 of the Cochrane Handbook of Systematic Reviews of Diagnostic Test Accuracy, advocate more sophisticated methods than previously. This paper describes a web-based application - MetaBayesDTA - that makes many advanced analysis methods in this area more accessible. Results We created the app using R, the Shiny package and Stan. It allows for a broad array of analyses based on the bivariate model including extensions for subgroup analysis, meta-regression and comparative test accuracy evaluation. It also conducts analyses not assuming a perfect reference standard, including allowing for the use of different reference tests. Conclusions Due to its user-friendliness and broad array of features, MetaBayesDTA should appeal to researchers with varying levels of expertise. We anticipate that the application will encourage higher levels of uptake of more advanced methods, which ultimately should improve the quality of test accuracy reviews.

BioMed Central

In contrast, here's the defaults worked out by a few #RStats nerds in a shed.

(I'm aware that if histogram defaults are carried over from S then they probably had a building rather than a shed).

Looking at some disease counts in an atrocity of a spreadsheet so thought I'd do a quick histogram in excel rather than messing around getting it into #RStats.

And this is the best defaults a $2 Trillion company can come up with for one of its core products?

Lots of #PotentiallyUsefulData. Disaster exposure models across Africa forecast into the future. https://sciencedirect.com/science/article/pii/S2212420922000425?dgcid=author

Guess I should do a more proper intro. I'm a newish lecturer in biostatistics at U. of Leicester.

My background is in ecology, #malaria and #AirPollution research, but statistical methods have been central to my work for a while now.

I'm interested in problems relating to data with mismatched resolution or about combining #MachineLearning and statistics. I'm a methodological pragmatist.

If anyone couldn't make my workshops on disaggregation regression (combining areal response data and raster covariates), I've uploaded the recording here. https://t.co/XuF18sVBYi
Disaggregation regression workshop

YouTube