Frédéric RimetMar 27

Our new paper (in french) about metabarcoding phytoplankton in France

"Analyse du phytoplancton par l’ADN environnemental : nouveaux outils pour évaluer la qualité écologique des plans d’eau"
https://revue-set.fr/article/view/9926
#phytoplankton #edna #metabarcoding #lake

Bravo @ Clelia DURAN https://orcid.org/0009-0000-0450-3842
@ Laurine Viollaz https://orcid.org/0009-0004-9791-7962
@ Benjamin Alric https://orcid.org/0000-0003-2774-0546
@ Christophe Laplace-Treyture https://orcid.org/0000-0002-0833-473X
@ Isabelle Domaizon
https://orcid.org/0000-0001-9785-3082

Show threadFrédéric Rimet
We create taxo free indices based on classical #stenoecie #sensitivity metrics and #network #topologies
Mar 27 at 2:40pmWeb
Show threadFrédéric RimetMar 27
First, classical taxo free index based on stenoecy and sensitivity metrics
thanks to @ Laurine Viollaz https://orcid.org/0009-0004-9791-7962
see her paper https://pubs.acs.org/doi/10.1021/acsestwater.5c00669
Show threadFrédéric RimetMar 27
indices based on tological metrics done by benjamin Alric https://orcid.org/0000-0003-2774-0546
Show threadFrédéric RimetMar 27
the results of the indices are mingingfull : see the map of France with all the lakes where we assessed the ecological quality based on phytoplankton metabarcoding taxo-free indices
#lake #quality #ecology #nature
Show threadFrédéric RimetMar 27
This publication is the summary of 6 years developments. All tools are freely available at
https://carrtel-collection.hub.inrae.fr/barcoding-databases/phytool
#algae #bloom #nature #ecology #science #barcoding #metabarcoding #eDNA #omics