| Website | https://multiqc.info |
| GitHub | https://github.com/ewels/MultiQC |
| https://twitter.com/MultiQC |
Another quality of life improvement is that we now have a #JSONschema via @pydantic for #MultiQC configuration files 🎉
This has been added to schemastore.org so that config files in #VSCode & other IDEs automatically get integrated error checking as you type, see https://docs.seqera.io/multiqc/getting_started/config#json-schema-validation
Did you see, #MultiQC v1.28 went out a few days ago!
There are a handful of release highlights for this version, but perhaps the most exciting is that .gif, .webp and .tiff files are now supported for #CustomContent - you can finally put your favourite gifs into reports! Just name them *_mqc.gif
MultiQC v1.27 was released yesterday. It includes one major new feature:
=== ✨ AI summaries ✨ ===
LLMs are a natural next step for helping scientists understand large datasets. @multiqc now has built-in integration with #Seqera AI as well as #OpenAI and #AnthropicAI 🤖
The premise is fairly simple:
#MultiQC builds prompts with sample data and sends these to LLMs to get summaries.
This can be done at report-generation time and also *interactively* on-demand when reading the report.
Sneaking a little holiday gift in at the last moment: @multiqc v1.26 just released!
- 🆕 10 new tools supported
- 💫 12 modules updated
- 🛠️ Bug fixes, improvements and refactoring!
If you're quick, you might see a little christmassy easter egg!
https://github.com/MultiQC/MultiQC/releases/tag/v1.26
New in this release: report toolbox settings (highlights, renaming, hiding samples) are automatically saved to the browser's local storage. So next time you open the same report they'll show up again! ✨💾
Next up - Box plots were added as a new plot type back in v1.21, but only for folks writing MultiQC modules.
Now with v1.25 you can also use box plots with Custom Content!
MultiQC v1.25 is released! 🚀
Did you ever get annoyed by having lots of empty space in General Statistics because of FastQC _1 and _2 samples?
Good news - MultiQC can now group samples! Try it out by setting `table_sample_merge`: https://multiqc.info/docs/reports/customisation/#sample-grouping
Wow! @multiqc just passed another milestone - over 5000 citations!! 🎉
Huge thanks to everyone who made the effort to add the citation. And as always - do remember to also cite the tools lower in the stack if you can! ❤️
Just merged / closed the 1000th pull-request on the @multiqc GitHub repository! ✨ 🎉
That's a whole lot of contributions.. Thank you to every one of those PR authors 🙌🏻
https://github.com/MultiQC/MultiQC/pulls?q=is%3Apr+is%3Aclosed
For the most part, we've not changed how report plots look or feel. One notable exception is the beeswarm plot 🐝 which we've replaced with a violin plot 🎻
This does a much better job of showing sample distributions, and works well with hundreds of thousands of samples..
