GWAS Catalog

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The NHGRI-EBI Catalog of genome-wide association studies (GWAS)
Submit your data on bit.ly/38rNSjx

#OpenAccess #FAIRprinciples

Websitewww.ebi.ac.uk/gwas
Twitter@gwascatalog
LinkedInGWAS Catalog
GWAS CatalogAug 7, 2025

🚨 Join us at #ASHG25!
We’re unveiling a new standard for Predicted Effector Gene (PEG) data - designed to make gene prioritisation more transparent and #FAIR.

What you'll get:
✅ Reusable PEG matrix framework pointing to key genes
✅ Real examples of enhanced PEG knowledge sharing
✅ Practical framework for #FAIR genomics data
✅ Your voice in shaping the standard!
🧬 Whether you build or use PEG lists, this is your moment to lead. Let’s make PEG data truly work for the community!
#EffectorGene

GWAS CatalogNov 22, 2024
Following the NASEM report, we updated the population descriptors and piloted what is currently reported in the literature. You are still on time to participate in our survey regarding population descriptors
📝 tinyurl.com/yc6wwx53
📷 Share with
#gwas
colleagues
GWAS CatalogNov 22, 2024
Did you know you can access (if provided by authors, please do!) COHORT information?
www.ebi.ac.uk/gwas/ -> Download -> Files -> Studies. As shown in the figure,
#UKBiobank is the biggest contributor!
Show threadGWAS CatalogNov 22, 2024
We made several changes in our UI and now loading and searching in the UI is faster! Thanks to
#humanecosystems
, we could also add functionalities for easier GxE search.
Show threadGWAS CatalogNov 22, 2024
Our standard format for
#SumStats
data and metadata (GWAS-SFF) has been fully implemented in our submission pipeline!
GWAS CatalogNov 22, 2024
NEWS! We are happy to announce our latest resource update paper has been published in Nucleic Acid Research! 🎉
tinyurl.com/4s9bvv2f
You can find a summary in our blog tinyurl.com/527tu5s5 or check this 🧵
GWAS CatalogNov 20, 2024

NEWS! Check our wrap-up about #ashg24 https://shorturl.at/WcTiz

Something is missing? Let us know!

🙌 Thanks, ASHG, for giving us the floor to share updates with #genetics community, delivered by our colleague @mariacerezo.bsky.social

#OpenAccess #gwas #gwasdatahero

Stronger together @ebi.embl.org @NIH

GWAS Catalog on LinkedIn: #gwasdatahero #ashg2024

Meeting several of our #gwasdatahero during the #ASHG2024 was fantastic! ⌛ It's time for a wrap-up! 💪 GWAS continues to be a methodology heavily used in…

GWAS CatalogJun 20, 2024

HELP! 💻 Are you accessing programmatically to GWAS Catalogue data?

(1) via the #GWAS Catalog #REST_API
(2)via #gwasrapidd (R)
(3)via #pandasgwas (🐍)
(4) Other?

Fill out the survey and help us to improve! https://forms.gle/u4p4asLvGDALxHmf8

⏰ Less than a minute!
#openaccess #FAIRdata

GWAS Catalog programmatic access

Do you access GWAS Catalog data programmatically? If so, please help us understand your usage better

Google Docs
Show threadGWAS CatalogJun 12, 2024
#gwaxplanation #traitpage How do you find if a gene has been linked to a trait? Search for the trait -> select trait page -> scroll down to ‘Associations’ -> check for the gene of interest by searching in the ‘Mapped Gene’ column→check how many associations are present (2/2)
GWAS CatalogJun 12, 2024
#gwaxplanation #traitpage
👨‍🎓 👩‍💻 👩‍🎓 👨‍💻
How do you find studies associated with a trait? Search for the trait of interest -> select trait page -> untick ‘Include child trait data’ (child traits are the descendants of a trait)->click on the ‘Studies’ tab ->export the result (1/2)👇 👇