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Sr. Scientist Bioinformatics and Microbiology at Danone nutricia research 🇮🇳 | 🇳🇱 | Opinions are mine |
Microbiome Data Science: http://tinyurl.com/mdsci
Website: https://microsud.github.io/sudarshanshetty.io/
RT @NatureMicrobiol
OUT NOW Bacillus subtilis alters growth rate according to cell wall precursor availability under different nutrient conditions https://www.nature.com/articles/s41564-023-01329-7
Growth rate is modulated by monitoring cell wall precursors in Bacillus subtilis - Nature Microbiology

Bacillus subtilis senses nutrient conditions via PrkC to modulate growth rate.

Nature
Gut Microbiome Composition Reveals the Distinctiveness between the Bengali people and the Indigenous Ethnicities in Bangladesh https://www.biorxiv.org/content/10.1101/2023.02.15.528648v1?med=mas
RT @eisharmhatre
@SpringerNatJobs why don't you mention you are not sponsoring visas in your job ad? It is really frustrating to make it to the interview and then be told 'btw we don't sponsor visas!' @NaturePortfolio @NatureRevGenet @BioMedCentral
Higher-order interactions shape microbial interactions as microbial community complexity increases |
#microbialcommunities #microbiome
https://www.nature.com/articles/s41598-022-25303-1/metrics
Article Metrics - Higher-order interactions shape microbial interactions as microbial community complexity increases | Scientific Reports

Longitudinal, Multi-Platform #Metagenomics Yields a High-Quality Genomic Catalog and Guides an In Vitro Model for #Cheese Communities -
#microbiome
https://pubmed.ncbi.nlm.nih.gov/36622155/
Longitudinal, Multi-Platform Metagenomics Yields a High-Quality Genomic Catalog and Guides an In Vitro Model for Cheese Communities - PubMed

Microbiomes are intricately intertwined with human health, geochemical cycles, and food production. While many microbiomes of interest are highly complex and experimentally intractable, cheese rind microbiomes have proven to be powerful model systems for the study of microbial interactions. To provi …

PubMed

I’m looking for a senior data science position!

👩‍🔬 I’ve built and run A/B testing platforms
💻 I am experienced in modeling in R & Python
📚 I have coauthored a book on DS careers (http://datascicareer.com)
🤝 I've empowered product teams with statistical analysis, dashboards, and reporting

Remote or Hybrid (SLC based). Please reach out if you want to chat!

Build a Career in Data Science

A guide to landing your first data science job and developing into a valued senior employee. Learn how to craft an amazing resume and ace your interviews.

Manning Publications

Happy to announce that posit::conf(2023) has an updated location and date!

Posit will host our upcoming annual conference at the Hyatt Regency Chicago from Sunday, September 17 - Wednesday, September 20, 2023.

More details coming in February!

#positconf2023

Want to automate routine and basic microbiome data analysis tasks in R?
@quarto_pub is an impressive tool from @posit_pbc for this.
Here is a tutorial that shows how to automate repetitive microbiome analytics using Quarto and R/RStudio 👇
https://microsud.github.io/quarto_microbiome/
Automate microbiome analysis - Automate Microbiome Analysis Using Quarto

A New Year, a new, fully funded PhD project in my group: 'The gut phageome as a driver for microbiome dynamics in critically ill patients'.

Supervision by Andy Millard (University of Leicester) and myself: https://more.bham.ac.uk/mrc-aim/phd-opportunities/

Email me (w dot vanschaik at bham dot ac dot uk) for questions.

Project outline below, deadline for applications 16 Jan.

PhD Opportunities – MRC AIM

Pan-genome study underling the extent of genomic variation of invasive Streptococcus pneumoniae in Malawi https://www.biorxiv.org/content/10.1101/2023.01.02.522535v1?med=mas