There is the "go-nuclear" GitHub repository accompanying our just submitted paper on robust and widely applicable 3D nuclear segmentation. Lot's of background and methodology.

https://github.com/kreshuklab/go-nuclear

https://bit.ly/3uG2Brd

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GitHub - kreshuklab/go-nuclear: Guides and code for 3D nuclear instance segmentation

Guides and code for 3D nuclear instance segmentation - kreshuklab/go-nuclear

GitHub