Rémi Gau

So you have a #BIDS #fmri dataset and wished you coud have the #eyetracking data to tell you where participants were looking during the experiment.

So here is "bidsmreye": a BIDS app that wraps around the deepmreye python package that uses a pre trained machine learning model to decode gaze position from the time series extracted from the eye voxels.

https://pypi.org/project/bidsmreye

https://github.com/cpp-lln-lab/bidsMReye

https://github.com/DeepMReye/DeepMReye

bidsmreye

bids app using deepMReye to decode eye motion for fMRI time series data

PyPI
Dec 19, 2022 at 1:49pmWeb
Show threadRémi GauDec 19, 2022
Obviously get in touch and open an issue on github if you encounter any problem.
Show threadRémi GauDec 20, 2022
@MatthiasNau did not have your handle when I created that toot.
Show threadMatthias NauDec 20, 2022
Thanks so much, @RemiGau, for putting this together, and in general for contributing to #DeepMReye in the past months! It is such a useful extension and will make it easier to run it on #fMRIprep outputs etc. for many people.
Show threadRémi GauDec 22, 2022
@MatthiasNau if it were up to me everything should be a BIDS app...
Show threadMatt KrauseDec 19, 2022
@RemiGau What a fantastic name!
Show threadRémi GauDec 19, 2022
@prokraustinator well the deepmreye folks had made the bids app name pretty self evident. So I can't take all the credit.
Show threadSprintiDec 19, 2022
@RemiGau
Related project:
https://github.com/JohannesKirchner/MREyeTrack-Demo
GitHub - JohannesKirchner/MREyeTrack-Demo

Contribute to JohannesKirchner/MREyeTrack-Demo development by creating an account on GitHub.

GitHub