3-Apr-2025
#MolecularClock analysis shows #bacteria used #oxygen long before widespread photosynthesis
Scientists use the #GreatOxidationEvent and how organisms adapted to it to map bacterial #evolution

https://www.eurekalert.org/news-releases/1078069 #science #astrobiology

Molecular clock analysis shows bacteria used oxygen long before widespread photosynthesis

In a new study published in Science, researchers from the Model-Based Evolutionary Genomics Unit at the Okinawa Institute of Science and Technology (OIST) and their international collaborators have constructed a detailed timeline for bacterial evolution and oxygen adaptation. Their findings suggest some bacteria could use trace oxygen long before evolving the ability to produce it through photosynthesis. 

EurekAlert!

#MolecularClock analysis shows #bacteria used oxygen long before widespread photosynthesis
https://phys.org/news/2025-04-molecular-clock-analysis-bacteria-oxygen.html

A geological timescale for bacterial #evolution and oxygen adaptation https://www.science.org/doi/10.1126/science.ADP1853

"the earliest aerobic transition occurred in an ancestor of photosynthetic #cyanobacteria, indicating that the ability to utilize trace amounts of oxygen may have allowed the development of genes central to oxygenic #photosynthesis."

Molecular clock analysis shows bacteria used oxygen long before widespread photosynthesis

Microbial organisms dominate life on Earth, but tracing their early history and evolution is difficult because they rarely fossilize. Determining when exactly a particular group of microbes first appeared is especially hard. However, ancient sediments and rocks hold chemical clues of available nutrients that could support the growth of bacteria.

Phys.org

clockor2.github.io seems like a friendly way to fit molecular clocks:

https://nitter.net/LeoPhylostone/status/1680845750635479040

#MolecularClock #Phylogenetics

Leo Featherstone (@LeoPhylostone)

🚨 Want to fit a molecular clock, or 2? 🚨 πŸ‘‰ Try http://clockor2.github.io - a client side tool for fitting global and local clocks with root-to-tip regression. Developed in collaboration with @wytamma, @arambaut, and @sebduchene (https://rb.gy/dro6j)

Nitter
A highly precise terahertz molecular clock

In recent years, many physicists worldwide have introduced atomic clocks, systems to measure the passing of time that are based on quantum states of atoms. These clocks can have numerous valuable applications, for instance in the development of satellite and navigation systems.

Phys.org