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Nextstrain is happy to announce a major update to our tuberculosis analysis, making it our first real-time (continually updated) analysis for a bacterial pathogen. Please see our new blog post for details:
https://nextstrain.org/blog/2025-11-17-tuberculosis-resources
Full blog post explaining situation and background is available here:
https://nextstrain.org/blog/2025-11-06-gisaid-based-ncov-analyses
Nextstrain is happy to announce the availability of new resources for mumps, as described in our recent blog post. We welcome any feedback on these new resources!
Nextstrain is happy to announce the availability of a Rubella dataset — please see our new blog post for details. We welcome feedback from Rubella researchers on these new resources!
The Nextstrain team has updated our core pathogen workflows to be compatible with Snakemake v8 or higher and has updated the Nextstrain runtimes to include Snakemake v9. Please see our new blog post for more details:
Happy Friday! We've got a new blog post all about a new feature that was recently added to the Nextstrain CLI: `nextstrain run`
This is a foundational component for a new, easier way to re-use Nextstrain workflows, take a look!
https://nextstrain.org/blog/2025-06-13-introducing-nextstrain-run
