Chris Macdonald

42 Followers
99 Following
20 Posts
Postdoc in the Fraser Lab at UCSF, messing around with proteins. Sentimental empiricist
websitehttps://odcambc.github.io/
twitterhttps://twitter.com/protostasis
well there’s your problem

This WaPo piece on the parents' rights movements plan to destroy public education in the U.S. is essential.

Unlike Assigned, WaPo's stories don't typically include screenshots of batshit crazy stuff they found, so I went and took one (from a link in the piece) that has to be seen to be believed.

https://www.washingtonpost.com/education/2023/08/29/michael-farris-homeschoolers-parents-rights-ziklag/

The Christian home-schooler who made ‘parental rights’ a GOP rallying cry

On a private call with Christian millionaires, home-schooling pioneer Michael Farris pushed for a strategy aimed at siphoning billions of tax dollars from public schools

The Washington Post
LOESS spotted in the wild
Now I’m sure I’m in Minneapolis
@gendor Yeah! We have a couple, actually. We have been interested in automation and experimental evolution for a while (or at least I have), so it’s been a great platform to get into that. We’ve done some antibiotic selections with morbidostat conditions and a bunch of turbidostat growths for plasmid preps. Very fun so far!
@ZaneSelvans @bartbing @ct_bergstrom Pretty neat - seems like a single residue change is enough to prevent capsaicin binding in avian TRPV1! https://www.nature.com/articles/s41598-020-64584-2
A single TRPV1 amino acid controls species sensitivity to capsaicin - Scientific Reports

Chili peppers produce capsaicin (a vanilloid) that activates the transient receptor potential cation channel subfamily V member 1 (TRPV1) on sensory neurons to alter their membrane potential and induce pain. To identify residues responsible for differential TRPV1 capsaicin sensitivity among species, we used intracellular Ca2+ imaging to characterize chimeras composed of capsaicin-sensitive rat TRPV1 (rTRPV1) and capsaicin-insensitive chicken TRPV1 (cTRPV1) exposed to a series of capsaicinoids. We found that chimeras containing rat E570-V686 swapped into chicken receptors displayed capsaicin sensitivity, and that simply changing the alanine at position 578 in the S4-S5 helix of the chicken receptor to a glutamic acid was sufficient to endow it with capsaicin sensitivity in the micromolar range. Moreover, introduction of lysine, glutamine or proline at residue A578 also elicited capsaicin sensitivity in cTRPV1. Similarly, replacing corresponding rTRPV1 residue E570 with lysine or glutamine retained capsaicin sensitivity. The hydrophilic capsaicin analog Cap-EA activated a cTRPV1-A578E mutant, suggesting that A578 may participate in vanilloid binding. The hydrophilic vanilloid agonist zingerone did not activate any A578 mutants with capsaicin sensitivity, suggesting that the vanilloid group alone is not sufficient for receptor activation. Our study demonstrates that a subtle modification of TRPV1 in different species globally alters capsaicin responses.

Nature
@irisvirus Looks awesome! I have random spare cherry keycaps if you need some

I've been out of touch so I'm just making my way through the Quietus 2022 list...lazy.

This was great: the copy uses "lissom" somewhere and that's accurate

https://gi-gi.bandcamp.com/album/sunchoke

Sunchoke, by Gi Gi

8 track album

Gi Gi
I appreciate how polite phenix is.